RYR1 - ryanodine receptor 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P21817 HGNC Approved Gene Symbol: RYR1 
Previous Symbols: MHS, MHS1, CCO Ensembl ENSG00000196218 
Synonyms : RYR, PPP1R137 Previous Names: "central core disease of muscle", "ryanodine receptor 1 (skeletal)"
HgncId : HGNC:10483  Omim: 180901 
GenBank: J05200 
 
Genomic coordinates: Cytogenetic location: 19q13.2 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RYR1 Gene Structure

Chromosome: chr19
Genbank ID: NM_000540 Orientation: +
Length coding sequence : 15114 nucleotides.
Regionstartendregion lengthphase at end
UTR38,924,33938,924,469
Exon38,924,47038,924,514450
Exon38,931,38538,931,5041200
Exon38,932,98938,933,0931050
Exon38,934,19838,934,272750
Exon38,934,35838,934,436791
Exon38,934,78938,934,9011130
Exon38,935,22438,935,317941
Exon38,937,11238,937,205942
Exon38,937,33438,937,408752
Exon38,938,99538,939,1511570
Exon38,939,28938,939,4531650
Exon38,942,40438,942,5251222
Exon38,943,45938,943,6541960
Exon38,945,87538,946,0101361
Exon38,946,09138,946,186961
Exon38,946,27338,946,3911190
Exon38,948,13738,948,2701342
Exon38,948,69138,948,9322421
Exon38,949,78638,949,9781932
Exon38,951,01538,951,2312170
Exon38,954,06338,954,1671050
Exon38,954,38738,954,4901042
Exon38,955,27938,955,362842
Exon38,956,73138,957,0383081
Exon38,958,25038,958,4522030
Exon38,959,60638,959,7801751
Exon38,959,94538,960,1532090
Exon38,964,01738,964,4113952
Exon38,965,95838,966,0901330
Exon38,968,35038,968,5101612
Exon38,969,07538,969,2401660
Exon38,973,66738,973,753870
Exon38,973,93038,974,1562272
Exon38,976,23038,976,8426130
Exon38,979,81738,980,0832670
Exon38,980,71638,980,9162010
Exon38,981,26138,981,3721121
Exon38,983,13038,983,2761471
Exon38,984,99238,985,2652742
Exon38,986,85538,986,9691150
Exon38,987,04938,987,1811331
Exon38,987,50038,987,594950
Exon38,989,74838,989,8831361
Exon38,990,27538,990,4611872
Exon38,990,54838,990,6561090
Exon38,991,24638,991,3661211
Exon38,991,46138,991,6301700
Exon38,993,14738,993,3672212
Exon38,993,52038,993,610910
Exon38,994,86038,995,0001410
Exon38,995,38838,995,5511642
Exon38,995,64338,995,721790
Exon38,995,94938,996,038900
Exon38,996,44638,996,5861410
Exon38,996,94338,997,017750
Exon38,997,11138,997,186761
Exon38,997,46938,997,5921242
Exon38,998,35238,998,4671161
Exon39,001,13839,001,205680
Exon39,001,30039,001,4211222
Exon39,002,20139,002,250501
Exon39,002,71239,002,772612
Exon39,002,88539,003,1232391
Exon39,005,66639,005,747822
Exon39,006,72739,006,8571311
Exon39,007,99939,008,3313331
Exon39,009,85439,010,0942412
Exon39,013,66839,013,755880
Exon39,013,85739,013,949930
Exon39,014,55539,014,569150
Exon39,015,97239,016,1421710
Exon39,017,63339,017,692600
Exon39,018,28739,018,4241380
Exon39,018,94639,019,0581132
Exon39,019,23939,019,335970
Exon39,019,59139,019,6971072
Exon39,023,13039,023,181520
Exon39,023,31139,023,376660
Exon39,025,36039,025,4591001
Exon39,025,78139,025,860800
Exon39,025,95639,026,032772
Exon39,026,63739,026,710741
Exon39,027,39039,027,407181
Exon39,028,52039,028,600811
Exon39,033,98739,034,075890
Exon39,034,17239,034,3001290
Exon39,034,41139,034,5151050
Exon39,037,08539,037,166821
Exon39,038,87339,039,0601880
Exon39,051,75339,052,0943420
Exon39,055,59939,056,4118130
Exon39,057,55139,057,627772
Exon39,058,41339,058,5571450
Exon39,061,24739,061,333870
Exon39,062,65939,062,9102520
Exon39,063,81739,063,9471312
Exon39,066,55939,066,601430
Exon39,068,55839,068,6881312
Exon39,068,78439,068,844610
Exon39,070,62239,070,7681470
Exon39,071,01039,071,1441350
Exon39,075,58339,075,7391571
Exon39,076,57839,076,642650
Exon39,076,73139,076,8311012
Exon39,077,16539,077,216520
Exon39,077,96539,078,060960
UTR39,078,06139,078,204