SPHKAP - SPHK1 interactor, AKAP domain containing

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q2M3C7 HGNC Approved Gene Symbol: SPHKAP 
Ensembl ENSG00000153820 
Synonyms : SKIP
HgncId : HGNC:30619  Omim: 611646 
Refseq: NM_030623 
 
Genomic coordinates: Cytogenetic location: 2q36.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SPHKAP Gene Structure

Chromosome: chr2
Genbank ID: NM_030623 Orientation: -
Length coding sequence : 5013 nucleotides.
Regionstartendregion lengthphase at end
UTR
229,046,315229,046,361
Exon229,046,283229,046,314322
Exon228,996,696228,996,8011060
Exon228,973,548228,973,6551080
Exon228,892,200228,892,259600
Exon228,890,110228,890,2441350
Exon228,886,427228,886,6822561
Exon228,881,122228,884,87237512
Exon228,860,225228,860,4101862
Exon228,855,990228,856,042531
Exon228,855,716228,855,9001850
Exon228,846,433228,846,5761440
UTR
228,844,670228,846,432