SYP - synaptophysin

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: no matching PDB entities View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P08247 HGNC Approved Gene Symbol: SYP 
Ensembl ENSG00000102003 
Synonyms : MRX96
HgncId : HGNC:11506  Omim: 313475 
Refseq: NM_003179  GenBank: X06389 
 
Genomic coordinates: Cytogenetic location: Xp11.23 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

SYP Gene Structure

Chromosome: chrX
Genbank ID: NM_003179 Orientation: -
Length coding sequence : 939 nucleotides.
Regionstartendregion lengthphase at end
UTR
49,056,64649,056,661
Exon49,056,61049,056,645360
Exon49,055,42749,055,492660
Exon49,054,17449,054,2981252
Exon49,050,62349,050,8181960
Exon49,049,72949,049,9201920
Exon49,047,89449,048,2203270
UTR
49,047,89049,047,893
UTR49,044,26449,045,735