TIAM2 - T-cell lymphoma invasion and metastasis 2

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

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Cross References
UniProt: Q8IVF5 HGNC Approved Gene Symbol: TIAM2 
Ensembl ENSG00000146426 
Synonyms : STEF
HgncId : HGNC:11806  Omim: 604709 
Refseq: NM_012454 
 
Genomic coordinates: Cytogenetic location: 6q25.2-q25.3 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

TIAM2 Gene Structure

Chromosome: chr6
Genbank ID: NM_012454 Orientation: +
Length coding sequence : 5103 nucleotides.
Regionstartendregion lengthphase at end
UTR155,450,351155,450,357
Exon155,450,358155,451,55111940
Exon155,458,311155,458,7464361
Exon155,465,740155,465,9121730
Exon155,469,244155,469,4682250
Exon155,485,549155,485,7341860
Exon155,486,397155,486,5431470
Exon155,497,950155,498,1111620
Exon155,500,173155,500,2771050
Exon155,500,512155,500,590791
Exon155,503,360155,503,452931
Exon155,504,371155,504,6342641
Exon155,532,338155,532,4411040
Exon155,561,664155,561,8431800
Exon155,565,145155,565,213690
Exon155,565,792155,565,9171260
Exon155,566,757155,566,8651091
Exon155,569,134155,569,3131801
Exon155,570,985155,571,1031190
Exon155,572,047155,572,1551091
Exon155,573,079155,573,137590
Exon155,574,082155,574,1871061
Exon155,575,107155,575,194882
Exon155,575,553155,575,7071551
Exon155,577,618155,578,2556380
UTR155,578,256155,578,857