The influence of EF-P on mRNA reading frame maintenance
Kimbrough, E.M., Nguyen, H.A., Li, H., Gamper, H., Hou, Y.M., Gonzalez, R.L., Dunham, C.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 6 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL1 | F [auth A] | 223 | Escherichia coli | Mutation(s): 0  Gene Names: rplA, A8502_003929, EIZ93_16315, FA868_22610, FHD44_21960, H0O53_14790, H0P11_21235 | ![]() |
UniProt | |||||
Find proteins for A0A5P0JAY3 (Escherichia coli) Explore A0A5P0JAY3  Go to UniProtKB:  A0A5P0JAY3 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A5P0JAY3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L2 | G [auth B] | 271 | Escherichia coli | Mutation(s): 0  Gene Names: rplB, b3317, JW3279 | ![]() |
UniProt | |||||
Find proteins for P60422 (Escherichia coli (strain K12)) Explore P60422  Go to UniProtKB:  P60422 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60422 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L3 | H [auth C] | 209 | Escherichia coli | Mutation(s): 0  Gene Names: rplC, b3320, JW3282 | ![]() |
UniProt | |||||
Find proteins for P60438 (Escherichia coli (strain K12)) Explore P60438  Go to UniProtKB:  P60438 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60438 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L4 | I [auth D] | 201 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Find proteins for A1AGK6 (Escherichia coli O1:K1 / APEC) Explore A1AGK6  Go to UniProtKB:  A1AGK6 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A1AGK6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L5 | J [auth E] | 177 | Escherichia coli | Mutation(s): 0  Gene Names: rplE, CCU01_002520 | ![]() |
UniProt | |||||
Find proteins for A0A4P8BX24 (Escherichia coli O145:NM) Explore A0A4P8BX24  Go to UniProtKB:  A0A4P8BX24 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A4P8BX24 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 11 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL6 | K [auth F] | 176 | Escherichia coli | Mutation(s): 0  Gene Names:  rplF, A5U30_004539, A8499_003319, A8502_004036, A9X72_02250, AC065_15940, ACN81_25455, ACU57_21025, AM464_09155, APX88_16140... | ![]() |
UniProt | |||||
Find proteins for C3SR17 (Escherichia coli) Explore C3SR17  Go to UniProtKB:  C3SR17 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SR17 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 12 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL9 | L [auth G] | 149 | Escherichia coli | Mutation(s): 0  Gene Names:  rplI, rplI_3, A5U30_004313, A6592_17560, A8499_001609, A8502_001475, A9X72_22650, AC065_21185, ACN81_01395, ACU57_18985... | ![]() |
UniProt | |||||
Find proteins for C3SFP2 (Escherichia coli) Explore C3SFP2  Go to UniProtKB:  C3SFP2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SFP2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 13 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L13 | M [auth J] | 142 | Escherichia coli | Mutation(s): 0  Gene Names: rplM, A1UI_03510 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 14 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L14 | N [auth K] | 122 | Escherichia coli | Mutation(s): 0  Gene Names: rplN, A13A_03633 | ![]() |
UniProt | |||||
Find proteins for S1NW45 (Escherichia coli KTE182) Explore S1NW45  Go to UniProtKB:  S1NW45 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | S1NW45 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 15 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L15 | O [auth L] | 143 | Escherichia coli | Mutation(s): 0  Gene Names:  rplO, A8C65_19395, A9R57_24660, ACU57_21045, AM464_09135, AUQ13_22145, BHS87_18545, BJJ90_02210, BUE81_25610, BW690_10710... | ![]() |
UniProt | |||||
Find proteins for A0A037Y8L6 (Escherichia coli) Explore A0A037Y8L6  Go to UniProtKB:  A0A037Y8L6 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A037Y8L6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 16 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L16 | P [auth M] | 136 | Escherichia coli | Mutation(s): 0  Gene Names: rplP, b3313, JW3275 | ![]() |
UniProt | |||||
Find proteins for P0ADY7 (Escherichia coli (strain K12)) Explore P0ADY7  Go to UniProtKB:  P0ADY7 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ADY7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 17 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL17 | Q [auth N] | 120 | Escherichia coli | Mutation(s): 0  Gene Names: rplQ, NCTC10767_01524, NCTC9081_00927 | ![]() |
UniProt | |||||
Find proteins for A0A2T1LEK9 (Escherichia coli) Explore A0A2T1LEK9  Go to UniProtKB:  A0A2T1LEK9 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A2T1LEK9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 18 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L18 | R [auth O] | 116 | Escherichia coli | Mutation(s): 0  Gene Names: rplR, EAVG_03042 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 19 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L19 | S [auth P] | 114 | Escherichia coli | Mutation(s): 0  Gene Names: rplS, A13A_02795 | ![]() |
UniProt | |||||
Find proteins for S1PSA3 (Escherichia coli KTE182) Explore S1PSA3  Go to UniProtKB:  S1PSA3 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | S1PSA3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 20 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein bL20 | T [auth Q] | 117 | Escherichia coli | Mutation(s): 0  Gene Names:  rplT, A5U30_001023, A6592_07370, A8499_000975, A8502_003610, A9X72_11350, AC065_06085, ACN81_10675, ACU57_21960, AM464_26495... | ![]() |
UniProt | |||||
Find proteins for C3T7Q7 (Escherichia coli) Explore C3T7Q7  Go to UniProtKB:  C3T7Q7 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3T7Q7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 21 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ribosomal protein L21 | U [auth R] | 103 | Escherichia coli | Mutation(s): 0  | ![]() |
UniProt | |||||
Find proteins for C3SSG2 (Escherichia coli) Explore C3SSG2  Go to UniProtKB:  C3SSG2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SSG2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 22 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L22 | V [auth S] | 110 | Escherichia coli | Mutation(s): 0  Gene Names: rplV, eryB, b3315, JW3277 | ![]() |
UniProt | |||||
Find proteins for P61175 (Escherichia coli (strain K12)) Explore P61175  Go to UniProtKB:  P61175 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P61175 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 23 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL23 | W [auth T] | 93 | Escherichia coli | Mutation(s): 0  Gene Names:  rplW, rplW_1, A5U30_004552, A6592_25795, A8499_003332, A8502_004023, A9X72_02185, AC065_16005, ACN81_25520, ACU57_20960... | ![]() |
UniProt | |||||
Find proteins for C3SQV2 (Escherichia coli) Explore C3SQV2  Go to UniProtKB:  C3SQV2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SQV2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 24 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Large ribosomal subunit protein uL24 | X [auth U] | 102 | Escherichia coli | Mutation(s): 0  Gene Names: rplX | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 25 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L25 | Y [auth V] | 94 | Escherichia coli | Mutation(s): 0  Gene Names: rplY | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 26 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L27 | Z [auth W] | 75 | Escherichia coli | Mutation(s): 0  Gene Names: rpmA, ECVG_02038 | ![]() |
UniProt | |||||
Find proteins for A0A1X3JCC7 (Escherichia coli H386) Explore A0A1X3JCC7  Go to UniProtKB:  A0A1X3JCC7 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A1X3JCC7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 27 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L28 | AA [auth X] | 77 | Escherichia coli | Mutation(s): 0  Gene Names: rpmB, G925_03874 | ![]() |
UniProt | |||||
Find proteins for A0A0E2KZD0 (Escherichia coli (strain UMEA 3162-1)) Explore A0A0E2KZD0  Go to UniProtKB:  A0A0E2KZD0 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0E2KZD0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 28 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L29 | BA [auth Y] | 63 | Escherichia coli | Mutation(s): 0  Gene Names: rpmC, ECDG_03892 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 29 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L30 | CA [auth Z] | 58 | Escherichia coli | Mutation(s): 0  Gene Names: rpmD, b3302, JW3264 | ![]() |
UniProt | |||||
Find proteins for P0AG51 (Escherichia coli (strain K12)) Explore P0AG51  Go to UniProtKB:  P0AG51 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AG51 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 30 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L32 | DA [auth b] | 56 | Escherichia coli | Mutation(s): 0  Gene Names: rpmF, ECDEC2D_1303 | ![]() |
UniProt | |||||
Find proteins for A0A828UBL8 (Escherichia coli DEC2D) Explore A0A828UBL8  Go to UniProtKB:  A0A828UBL8 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A828UBL8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 31 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L33 | EA [auth c] | 50 | Escherichia coli | Mutation(s): 0  Gene Names: rpmG, AC28_4219 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 32 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L34 | FA [auth d] | 46 | Escherichia coli | Mutation(s): 0  Gene Names: rpmH | ![]() |
UniProt | |||||
Find proteins for B7MGC4 (Escherichia coli O45:K1 (strain S88 / ExPEC)) Explore B7MGC4  Go to UniProtKB:  B7MGC4 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B7MGC4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 33 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L35 | GA [auth e] | 64 | Escherichia coli | Mutation(s): 0  Gene Names: rpmI, EC1303_c18870 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 34 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 50S ribosomal protein L36 | HA [auth f] | 38 | Escherichia coli | Mutation(s): 0  Gene Names: rpmJ | ![]() |
UniProt | |||||
Find proteins for A0A0E2L017 (Escherichia coli (strain UMEA 3162-1)) Explore A0A0E2L017  Go to UniProtKB:  A0A0E2L017 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0E2L017 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 35 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS3 | IA [auth h] | 206 | Escherichia coli | Mutation(s): 0  Gene Names: rpsC, b3314, JW3276 | ![]() |
UniProt | |||||
Find proteins for P0A7V3 (Escherichia coli (strain K12)) Explore P0A7V3  Go to UniProtKB:  P0A7V3 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A7V3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 36 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S4 | JA [auth i] | 205 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsD, rpsD_2, A2F99_003133, A5U30_004530, A6592_25685, A8499_003310, A8502_004045, A8X14_004364, A9X72_02295, AAG43_004468... | ![]() |
UniProt | |||||
Find proteins for C3SR62 (Escherichia coli) Explore C3SR62  Go to UniProtKB:  C3SR62 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SR62 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 37 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S5 | KA [auth j] | 157 | Escherichia coli | Mutation(s): 0  Gene Names: rpsE, ECJG_02962 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 38 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S6, non-modified isoform | LA [auth k] | 100 | Escherichia coli | Mutation(s): 0  Gene Names: rpsF, b4200, JW4158 | ![]() |
UniProt | |||||
Find proteins for P02358 (Escherichia coli (strain K12)) Explore P02358  Go to UniProtKB:  P02358 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02358 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 39 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S7 | MA [auth l] | 151 | Escherichia coli | Mutation(s): 0  Gene Names: rpsG, b3341, JW3303 | ![]() |
UniProt | |||||
Find proteins for P02359 (Escherichia coli (strain K12)) Explore P02359  Go to UniProtKB:  P02359 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02359 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 40 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S8 | NA [auth m] | 129 | Escherichia coli | Mutation(s): 0  Gene Names: rpsH, ECDEC2D_3910 | ![]() |
UniProt | |||||
Find proteins for A0A828U358 (Escherichia coli DEC2D) Explore A0A828U358  Go to UniProtKB:  A0A828U358 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A828U358 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 41 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS9 | OA [auth n] | 127 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsI, A5U30_002029, A6592_14035, A8499_002400, A8502_003025, A9X72_02640, AC065_15530, ACN81_18270, ACU57_14275, AM464_08780... | ![]() |
UniProt | |||||
Find proteins for C3SRY2 (Escherichia coli) Explore C3SRY2  Go to UniProtKB:  C3SRY2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SRY2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 42 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S10 | PA [auth o] | 98 | Escherichia coli | Mutation(s): 0  Gene Names: rpsJ, NRG857_16455 | ![]() |
UniProt | |||||
Find proteins for A0A0H3EQD3 (Escherichia coli O83:H1 (strain NRG 857C / AIEC)) Explore A0A0H3EQD3  Go to UniProtKB:  A0A0H3EQD3 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3EQD3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 43 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS11 | QA [auth p] | 116 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsK, A5U30_004531, A6592_25690, A8499_003311, A8502_004044, A9X72_02290, AC065_15900, ACN81_25415, ACU57_21065, AM464_09115... | ![]() |
UniProt | |||||
Find proteins for C3SR57 (Escherichia coli) Explore C3SR57  Go to UniProtKB:  C3SR57 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SR57 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 44 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS12 | RA [auth q] | 123 | Escherichia coli | Mutation(s): 0  Gene Names:  rpsL, rpsL_2, A5U30_003889, A6592_18175, A8499_001308, A8502_001035, A9X72_02055, AC065_16140, ACN81_28395, ACU57_16335... | ![]() |
UniProt | |||||
Find proteins for C3SQR7 (Escherichia coli) Explore C3SQR7  Go to UniProtKB:  C3SQR7 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SQR7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 45 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S13 | SA [auth r] | 114 | Escherichia coli | Mutation(s): 0  Gene Names: rpsM, A13A_03621 | ![]() |
UniProt | |||||
Find proteins for S1P5F8 (Escherichia coli KTE182) Explore S1P5F8  Go to UniProtKB:  S1P5F8 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | S1P5F8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 46 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein uS14 | TA [auth s] | 100 | Escherichia coli | Mutation(s): 0  Gene Names: rpsN, EIMP300_17810 | ![]() |
UniProt | |||||
Find proteins for A0A8S0FJJ0 (Escherichia coli) Explore A0A8S0FJJ0  Go to UniProtKB:  A0A8S0FJJ0 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A8S0FJJ0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 47 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S15 | UA [auth t] | 88 | Escherichia coli | Mutation(s): 0  Gene Names: rpsO, HMPREF9536_02433 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 48 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S16 | VA [auth u] | 82 | Escherichia coli | Mutation(s): 0  Gene Names: rpsP | ![]() |
UniProt | |||||
Find proteins for C3SYP2 (Escherichia coli) Explore C3SYP2  Go to UniProtKB:  C3SYP2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3SYP2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 49 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S17 | WA [auth v] | 80 | Escherichia coli | Mutation(s): 0  Gene Names: rpsQ, AC28_3826 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 50 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S18 | XA [auth w] | 65 | Escherichia coli | Mutation(s): 0  Gene Names: rpsR, ECW_m4565 | ![]() |
UniProt | |||||
Find proteins for E0J6I2 (Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB 8666 / NRRL B-766 / W)) Explore E0J6I2  Go to UniProtKB:  E0J6I2 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | E0J6I2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 51 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S19 | YA [auth x] | 79 | Escherichia coli | Mutation(s): 0  Gene Names: rpsS, ECKIH15140_04691 | ![]() |
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 52 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 30S ribosomal protein S20 | ZA [auth y] | 85 | Escherichia coli | Mutation(s): 0  Gene Names: rpsT | ![]() |
UniProt | |||||
Find proteins for C3TRH7 (Escherichia coli) Explore C3TRH7  Go to UniProtKB:  C3TRH7 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3TRH7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 53 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small ribosomal subunit protein bS21 | AB [auth z] | 65 | Escherichia coli | Mutation(s): 0  Gene Names: rpsU, b3065, JW3037 | ![]() |
UniProt | |||||
Find proteins for P68679 (Escherichia coli (strain K12)) Explore P68679  Go to UniProtKB:  P68679 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P68679 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| 23S ribosomal RNA | A [auth 1] | 2,903 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| 16S ribosomal RNA | B [auth 2] | 1,539 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| 5S ribosomal RNA | C [auth 3] | 120 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
| |||||
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| mRNA | D [auth 4] | 18 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
| |||||
Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| tRNA^ProL (GGG) | E [auth 5] | 77 | Escherichia coli | ![]() | |
Sequence AnnotationsExpand | |||||
| |||||
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | AC [auth 1] AD [auth 1] AE [auth 1] AF [auth 1] AG [auth 1] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01GM093278 |
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R35GM34931 |
| National Science Foundation (NSF, United States) | United States | 1808771 |