5FNV

a new complex structure of tubulin with an alpha-beta unsaturated lactone


Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpecies
A, C
d5fnva1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches CHICKEN (Gallus gallus ) [TaxId: 9031 ]
A, C
d5fnva2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches CHICKEN (Gallus gallus ) [TaxId: 9031 ]
A, C
d5fnvc1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches CHICKEN (Gallus gallus ) [TaxId: 9031 ]
A, C
d5fnvc2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches CHICKEN (Gallus gallus ) [TaxId: 9031 ]
B, D
d5fnvb1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Tubulin beta-subunit NORWAY RAT (Rattus norvegicus ) [TaxId: 10116 ]
B, D
d5fnvb2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain Tubulin beta-subunit NORWAY RAT (Rattus norvegicus ) [TaxId: 10116 ]
B, D
d5fnvd1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Tubulin beta-subunit NORWAY RAT (Rattus norvegicus ) [TaxId: 10116 ]
B, D
d5fnvd2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain Tubulin beta-subunit NORWAY RAT (Rattus norvegicus ) [TaxId: 10116 ]
d5fnve_ All alpha proteins Non-globular all-alpha subunits of globular proteins Stathmin Stathmin automated matches (Sus scrofa ) [TaxId: 9823 ]
d5fnvf1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain automated matches automated matches (Sus scrofa ) [TaxId: 9823 ]
d5fnvf3 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain-like Tubulin tyrosine ligase (TTL) C-terminal domain-like Tubulin tyrosine ligase (TTL) C-terminal domain (Sus scrofa ) [TaxId: 9823 ]
d5fnvf2 Artifacts Tags Tags Tags C-terminal Tags (Sus scrofa ) [TaxId: 9823 ]
ChainDomainClassArchitectureTopologyHomology
A, C
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
A, C
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
A, C
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
A, C
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
A, C
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
A, C
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
B, D
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
B, D
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
B, D
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
B, D
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
B, D
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
B, D
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
6.10.280.30 Special Helix non-globular Methane Monooxygenase Hydroxylase Chain G, domain 1
3.40.50.11480 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold
3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1
3.30.470.20 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
A, C
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
A, C
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
B, D
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
B, D
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00836Stathmin family (Stathmin)Stathmin family- Family
PF03133Tubulin-tyrosine ligase family (TTL)Tubulin-tyrosine ligase family- Family

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
TUBULIN ALPHA-1B CHAIN
B, D
TUBULIN BETA CHAIN
    STATHMIN-4
      TUBULIN TYROSINE LIGASE