5NO3

RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)


Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
BPF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
CPF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
CPF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
DPF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
DPF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
EPF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
FPF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
GPF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
HPF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
IPF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20e- Family
JPF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
KPF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
LPF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
MPF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
NPF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
OPF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PPF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
QPF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
RPF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
SPF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
TPF03193RsgA GTPase (RsgA_GTPase)RsgA GTPaseRsgA (also known as EngC and YjeQ) represents a protein family whose members are broadly conserved in bacteria and are indispensable for growth. The GTPase domain of RsgA is very similar to several P-loop GTPases, but differs in having a circular per ...RsgA (also known as EngC and YjeQ) represents a protein family whose members are broadly conserved in bacteria and are indispensable for growth. The GTPase domain of RsgA is very similar to several P-loop GTPases, but differs in having a circular permutation of the GTPase structure described by a G4-G1-G3 pattern [1].
Domain

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A16S ribosomal RNAnone none none
B30S ribosomal protein S2
D30S ribosomal protein S4
E30S ribosomal protein S5
F30S ribosomal protein S6
G30S ribosomal protein S7
H30S ribosomal protein S8
I30S ribosomal protein S9
J30S ribosomal protein S10
K30S ribosomal protein S11
L30S ribosomal protein S12
M30S ribosomal protein S13
N30S ribosomal protein S14
O30S ribosomal protein S15
P30S ribosomal protein S16
Q30S ribosomal protein S17
R30S ribosomal protein S18
S30S ribosomal protein S19
T30S ribosomal protein S20
ZSmall ribosomal subunit biogenesis GTPase RsgA