6K9V

Crystal structure of tubulin in complex with inhibitor D64


Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpecies
A, C
d6k9va1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ]
A, C
d6k9va2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ]
A, C
d6k9vc1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ]
A, C
d6k9vc2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ]
B, D
d6k9vb1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ]
B, D
d6k9vb2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ]
B, D
d6k9vd1 Alpha and beta proteins (a/b) Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain automated matches (Bos taurus ) [TaxId: 9913 ]
B, D
d6k9vd2 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin, C-terminal domain automated matches (Bos taurus ) [TaxId: 9913 ]
d6k9vf1 Alpha and beta proteins (a/b) PreATP-grasp domain PreATP-grasp domain Tubulin tyrosine ligase (TTL) N-terminal domain-like Tubulin tyrosine ligase (TTL) N-terminal domain Chicken (Gallus gallus ) [TaxId: 9031 ]
d6k9vf2 Alpha and beta proteins (a+b) ATP-grasp Glutathione synthetase ATP-binding domain-like Tubulin tyrosine ligase (TTL) C-terminal domain-like Tubulin tyrosine ligase (TTL) C-terminal domain Chicken (Gallus gallus ) [TaxId: 9031 ]
d6k9vf3 Artifacts Tags Tags Tags C-terminal Tags Chicken (Gallus gallus ) [TaxId: 9031 ]
d6k9ve_ All alpha proteins Non-globular all-alpha subunits of globular proteins Stathmin Stathmin Stathmin 4 Rat (Rattus norvegicus ) [TaxId: 10116 ]
ChainDomainClassArchitectureTopologyHomology
A, C
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
A, C
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
A, C
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
A, C
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
A, C
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
A, C
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
B, D
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
B, D
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
B, D
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
B, D
3.40.50.1440 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Tubulin/FtsZ, GTPase domain
B, D
3.30.1330.20 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: A
B, D
1.10.287.600 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin bin
6.10.280.30 Special Helix non-globular Methane Monooxygenase Hydroxylase Chain G, domain 1

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
A, C
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
A, C
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
B, D
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
B, D
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF03133Tubulin-tyrosine ligase family (TTL)Tubulin-tyrosine ligase family- Family
PF00836Stathmin family (Stathmin)Stathmin family- Family

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Tubulin alpha-1B chain
    B, D
    Tubulin beta-2B chain
      Tubulin tyrosine ligase
        Stathmin-4