6T59

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex


Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
APF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
APF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
BPF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
DPF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
DPF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
EPF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
EPF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
FPF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
FPF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
HPF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
IPF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Family
JPF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
JPF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
LPF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
MPF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
OPF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
SPF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
UPF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
VPF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
WPF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
WPF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
XPF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
XPF00467KOW motif (KOW)KOW motif- Family
YPF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
YPF00467KOW motif (KOW)KOW motif- Family
ZPF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
AAPF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
CAPF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
DAPF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
EAPF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
FAPF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
GAPF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
HAPF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
IAPF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
JAPF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
KAPF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
MAPF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
NAPF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
OAPF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
PAPF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
RAPF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
RAPF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
ZAPF16669Tetratricopeptide repeat protein 5 OB fold domain (TTC5_OB)Tetratricopeptide repeat protein 5 OB fold domainThis OB fold domain is located at the C-terminus of Tetratricopeptide repeat protein 5 and is required for effective p53 response [1].Domain
BAPF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A3Ribosomal protein L8
B3uL3
C3uL4none none none
D360S ribosomal protein L5
E360S ribosomal protein L6
F3Ul30
H3uL6
I360S ribosomal protein L10
J3Ribosomal protein L11
L3eL13none none none
M3Ribosomal protein L14
N3Ribosomal protein L15
O3uL13none none none
P3uL22
Q3eL18none none none
S3eL20none none none
T3eL21
U3eL22none none none
V3Ribosomal protein L23
W3eL24
X3uL23
Y3Ribosomal protein L26
Z360S ribosomal protein L27
a3uL15
b3eL29
d3eL31
e3eL32
f3eL33
g3eL34
h3uL29
i360S ribosomal protein L36
j3Ribosomal protein L37
k3eL38
l3eL39
m3eL40none none none
n360s ribosomal protein l41
o3eL42
p3eL43
r3eL28
s3uL10none none none
t3Ribosomal protein L12
23P-site tRNAnone none none
5428S ribosomal RNAnone none none
745S ribosomal RNAnone none none
845.8S ribosomal RNAnone none none
NINascent polypeptide-associated complex subunit alpha N-terminal regionnone none none
NANascent polypeptide-associated complex subunit alphanone none none
NBTranscription factor BTF3none none none
TTTetratricopeptide repeat protein 5
1Tubulin Betanone none none
R3eL19none none none
c3eL30
G3eL8none none none