CRYSTAL STRUCTURE OF SPOOB FROM BACILLUS SUBTILIS
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1ixmb_ | Alpha and beta proteins (a+b) | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
A | d1ixma_ | Alpha and beta proteins (a+b) | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | Sporulation response regulatory protein Spo0B | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Sporulation response regulatory protein Spo0B | 8036215 | 3000617 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Sporulation response regulatory protein Spo0B | 8023835 | 4001965 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Sporulation response regulatory protein Spo0B | 8036215 | 3000617 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | SPOB_ab | e1ixmB1 | A: a+b two layers | X: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like | H: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (From Topology) | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: SPOB_ab | ECOD (1.6) |
A | SPOB_ab | e1ixmA1 | A: a+b two layers | X: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like | H: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (From Topology) | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: SPOB_ab | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.287.130 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | CATH (4.3.0) |
B | 3.30.565.30 | Alpha Beta | 2-Layer Sandwich | Heat Shock Protein 90 | Sporulation initiation phosphotransferase B (SpoOB), C-terminal domain | CATH (4.3.0) |
A | 1.10.287.130 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | CATH (4.3.0) |
A | 3.30.565.30 | Alpha Beta | 2-Layer Sandwich | Heat Shock Protein 90 | Sporulation initiation phosphotransferase B (SpoOB), C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14682 | Sporulation initiation phospho-transferase B, C-terminal (SPOB_ab) | Sporulation initiation phospho-transferase B, C-terminal | Sporulation initiation phospho-transferase B or SpoOB is part of a phospho-relay that initiates sporulation in Bacillus subtilis. Spo0B is a two-domain protein consisting of an N-terminal alpha-helical hairpin domain and a C-terminal alpha/beta domai ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PROTEIN (SPORULATION RESPONSE REGULATORY PROTEIN) |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039506 | SpoOB, alpha-helical domain | Domain | |
IPR037100 | Sporulation initiation phosphotransferase B, C-terminal domain superfamily | Homologous Superfamily | |
IPR016122 | Sporulation initiation phosphotransferase B, C-terminal | Domain | |
IPR016120 | Signal transduction histidine kinase, sporulation regulator SpoOB | Homologous Superfamily |