1S2E | pdb_00001s2e

BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR, ALTERNATIVE FIT OF THE FIRST 19 RESIDUES


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1s2ea_ All beta proteins gp9 gp9 gp9 gp9 (Tequatrovirus T4 ) [TaxId: 10665 ], SCOPe (2.08)
Bd1s2eb_ All beta proteins gp9 gp9 gp9 gp9 (Tequatrovirus T4 ) [TaxId: 10665 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familygp9 8028872 4001664 SCOP2 (2022-06-29)
ASCOP2 Superfamilygp9 8041251 3000227 SCOP2 (2022-06-29)
BSCOP2B Superfamilygp9 8041251 3000227 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AT4_gp9_10_Ce1s2eA2 A: beta sandwichesX: gp9 C-terminal domain-likeH: gp9 C-terminal domain-related (From Topology)T: gp9 C-terminal domain-relatedF: T4_gp9_10_CECOD (1.6)
AT4_gp9_10_Ne1s2eA1 A: beta sandwichesX: gp9 N-terminal domain-likeH: gp9 N-terminal domain-related (From Topology)T: gp9 N-terminal domain-relatedF: T4_gp9_10_NECOD (1.6)
BT4_gp9_10_Ce1s2eB2 A: beta sandwichesX: gp9 C-terminal domain-likeH: gp9 C-terminal domain-related (From Topology)T: gp9 C-terminal domain-relatedF: T4_gp9_10_CECOD (1.6)
BT4_gp9_10_Ne1s2eB1 A: beta sandwichesX: gp9 N-terminal domain-likeH: gp9 N-terminal domain-related (From Topology)T: gp9 N-terminal domain-relatedF: T4_gp9_10_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07880Bacteriophage T4 gp9/10-like protein, N-terminal (T4_gp9_10_N)Bacteriophage T4 gp9/10-like protein, N-terminalThis entry represents the N-terminal domain of Baseplate protein gp9 from Bacteriophage T4, a component of the viral baseplate [1]. Gp9 connects the long tail fibres of the virus to the baseplate and triggers tail contraction after viral attachment t ...This entry represents the N-terminal domain of Baseplate protein gp9 from Bacteriophage T4, a component of the viral baseplate [1]. Gp9 connects the long tail fibres of the virus to the baseplate and triggers tail contraction after viral attachment to a host cell. The protein is active as a trimer, with each monomer being composed of three domains. The N-terminal domain consists of an extended polypeptide chain and two alpha helices. The alpha1 helix from each of the three monomers in the trimer interacts with its counterparts to form a coiled-coil structure. The middle domain is a seven-stranded beta-sandwich. This entry represents the region including these two domains. Noticeably, the long flexible region between N-terminal and middle domains may be required for the function of gp9 to transmit signals from the long tail fibres [2]. Together with gp11, gp10 initiates the assembly of wedges that then go on to associate with a hub to form the viral baseplate [1].
Domain