Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d2pu9c_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | Thioltransferase | automated matches | spinach (Spinacia oleracea ) [TaxId: 3562 ], | SCOPe (2.08) |
B | d2pu9b_ | All beta proteins | SH3-like barrel | Electron transport accessory proteins | Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain | Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
A | d2pu9a_ | Small proteins | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | (Synechocystis sp. ) [TaxId: 1143 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Thioredoxin-like | 8044362 | 3000031 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain | 8023698 | 4001755 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Electron transport accessory proteins | 8036078 | 3000325 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 8023697 | 4003579 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | 8036077 | 3001072 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Thioredoxin | e2pu9C1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
B | FeThRed_A | e2pu9B1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: FeThRed_A | ECOD (1.6) |
A | FeThRed_B | e2pu9A1 | A: few secondary structure elements | X: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain (From Topology) | H: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain (From Topology) | T: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain | F: FeThRed_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
B | 2.30.30.50 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
A | 3.90.460.10 | Alpha Beta | Alpha-Beta Complex | Ferredoxin Thioredoxin Reductase | Ferredoxin thioredoxin reductase catalytic beta subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00085 | Thioredoxin (Thioredoxin) | Thioredoxin | Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. | Domain | |
PF02941 | Ferredoxin thioredoxin reductase variable alpha chain (FeThRed_A) | Ferredoxin thioredoxin reductase variable alpha chain | Domain | ||
PF02943 | Ferredoxin thioredoxin reductase catalytic beta chain (FeThRed_B) | Ferredoxin thioredoxin reductase catalytic beta chain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily | |
IPR008990 | Electron transport accessory-like domain superfamily | Homologous Superfamily | |
IPR044166 | Ferredoxin-thioredoxin reductase, variable chain | Family | |
IPR004207 | Ferredoxin thioredoxin reductase, alpha chain | Domain | |
IPR036644 | Ferredoxin thioredoxin reductase catalytic beta subunit superfamily | Homologous Superfamily | |
IPR024707 | Ferredoxin-thioredoxin reductase catalytic subunit, cyanobacteria-type | Family | |
IPR004209 | Ferredoxin thioredoxin reductase catalytic beta subunit | Family |