Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
E [auth H]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
L [auth Q]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)
N [auth M]SCOP2B SuperfamilyRibosomal protein L228081524 3001078 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082521 3000334 SCOP2B (2022-06-29)
R [auth X]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
S [auth Y]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
T [auth P]SCOP2B SuperfamilyZn-binding ribosomal proteins8075050 3001320 SCOP2B (2022-06-29)
K [auth S]SCOP2B SuperfamilyProkaryotic ribosomal protein L178089010 3000995 SCOP2B (2022-06-29)
M [auth R]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
O [auth T]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8035415 3000210 SCOP2B (2022-06-29)
H [auth K]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRibosomal_L3e3iy9C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
E [auth H]Ribosomal_L9_Ne3iy9H1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
F [auth G]Ribosomal_L11e3iy9G1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
F [auth G]Ribosomal_L11_Ne3iy9G2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
G [auth J]Ribosomal_L13e3iy9J1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth I]Ribosomal_L16e3iy9I1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
L [auth Q]Ribosomal_L20e3iy9Q1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
N [auth M]Ribosomal_L22e3iy9M1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
P [auth N]ribosomal_L24_1e3iy9N1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
Q [auth O]Ribosomal_L27e3iy9O1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
R [auth X]Ribosomal_L29e3iy9X1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
S [auth Y]Ribosomal_L30e3iy9Y1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
T [auth P]Ribosomal_L33e3iy9P1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
K [auth S]Ribosomal_L17e3iy9S1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
M [auth R]Ribosomal_L21pe3iy9R1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
O [auth T]Ribosomal_L23_2e3iy9T1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
DRibosomal_L4e3iy9D1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
H [auth K]Ribosomal_L14e3iy9K1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
I [auth L]Ribosomal_L27Ae3iy9L1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
F [auth G]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
F [auth G]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
G [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
J [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
L [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
N [auth M]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
P [auth N]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
P [auth N]PF00467KOW motif (KOW)KOW motif- Family
Q [auth O]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
R [auth X]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
S [auth Y]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
T [auth P]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
K [auth S]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
M [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
O [auth T]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H [auth K]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
I [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
50S ribosomal protein L3
E [auth H]50S ribosomal protein L9
F [auth G]39S ribosomal protein L11, mitochondrial
G [auth J]50S ribosomal protein L13
J [auth I]39S ribosomal protein L16, mitochondrial
L [auth Q]50S ribosomal protein L20
N [auth M]39S ribosomal protein L22, mitochondrial
P [auth N]39S ribosomal protein L24, mitochondrial
Q [auth O]39S ribosomal protein L27, mitochondrial
R [auth X]50S ribosomal protein L29
S [auth Y]50S ribosomal protein L30
T [auth P]39S ribosomal protein L33, mitochondrial
Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit---
K [auth S]39S ribosomal protein L17, mitochondrial
M [auth R]50S ribosomal protein L21
O [auth T]50S ribosomal protein L23
39S ribosomal protein L2, mitochondrial
39S ribosomal protein L4, mitochondrial
H [auth K]50S ribosomal protein L14
I [auth L]50S ribosomal protein L15

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
E [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
E [auth H]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
E [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
E [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
E [auth H]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
E [auth H]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
E [auth H]IPR000244Large ribosomal subunit protein bL9Family
F [auth G]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
F [auth G]IPR000911Ribosomal protein uL11Family
F [auth G]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
F [auth G]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
F [auth G]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
F [auth G]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
G [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
G [auth J]IPR005822Large ribosomal subunit protein uL13Family
G [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
G [auth J]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
J [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
J [auth I]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
J [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
J [auth I]IPR047873Large ribosomal subunit protein uL16Family
L [auth Q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
L [auth Q]IPR005813Large ribosomal subunit protein bL20Family
N [auth M]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
N [auth M]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
N [auth M]IPR001063Large ribosomal subunit protein uL22Family
P [auth N]IPR003256Large ribosomal subunit protein uL24Family
P [auth N]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
P [auth N]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth N]IPR005824KOWDomain
P [auth N]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth N]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Q [auth O]IPR001684Large ribosomal subunit protein bL27Family
R [auth X]IPR001854Large ribosomal subunit protein uL29Family
R [auth X]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
R [auth X]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
S [auth Y]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
S [auth Y]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
S [auth Y]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
S [auth Y]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
T [auth P]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
T [auth P]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
T [auth P]IPR001705Large ribosomal subunit protein bL33Family
K [auth S]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
K [auth S]IPR000456Large ribosomal subunit protein bL17Family
M [auth R]IPR028909Large ribosomal subunit protein bL21-likeFamily
M [auth R]IPR001787Large ribosomal subunit protein bL21Family
M [auth R]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
M [auth R]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
O [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth T]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
O [auth T]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
O [auth T]IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth K]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
H [auth K]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
H [auth K]IPR000218Large ribosomal subunit protein uL14Family
H [auth K]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
I [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
I [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
I [auth L]IPR030878Large ribosomal subunit protein uL15Family
I [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
I [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily