3PUB | pdb_00003pub

Crystal structure of the Bombyx mori low molecular weight lipoprotein 7 (Bmlp7)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lipoprotein_11_C	e3pubA2	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: Lipoprotein_11_C	ECOD (1.6)
A	Lipoprotein_11_N	e3pubA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Lipoprotein_11_N	ECOD (1.6)
B	Lipoprotein_11_C	e3pubB1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: Lipoprotein_11_C	ECOD (1.6)
B	Lipoprotein_11_N	e3pubB2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Lipoprotein_11_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (4.3.0)
A	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
B	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (utative)
B	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03260	Lepidopteran low molecular weight (30 kD) lipoprotein (Lipoprotein_11)	Lepidopteran low molecular weight (30 kD) lipoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	30kDa protein	-	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004943	Lepidopteran low molecular weight lipoprotein	Family
A, B	IPR042046	Lepidopteran low molecular weight lipoprotein, N-terminal domain	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.