4PSM | pdb_00004psm

Crystal structure of pfuThermo-DBP-RP1 (crystal form II)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2 FamilyThermoDBP N-terminal DNA-binding domain-like 8051368 4007336 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055794 3002315 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055794 3002315 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055794 3002315 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055794 3002315 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDUF2258e4psmD1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: DUF2258ECOD (1.6)
CDUF2258e4psmC1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: DUF2258ECOD (1.6)
BDUF2258e4psmB1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: DUF2258ECOD (1.6)
ADUF2258e4psmA1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: DUF2258ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF10015ThermoDBP-related, archaea (ThermoDBP-RP_arch)ThermoDBP-related, archaea- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR017140ThermoDBP-related, archaeaDomain