4UJD | pdb_00004ujd

mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
W [auth AU]	Ribosomal_L22e	e4ujdAU1	A: a+b two layers	X: Ribosomal protein L22e (From Topology)	H: Ribosomal protein L22e (From Topology)	T: Ribosomal protein L22e	F: Ribosomal_L22e	ECOD (1.6)
GA [auth Ae]	Ribosomal_L32e	e4ujdAe1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L32e (From Topology)	T: Ribosomal protein L32e	F: Ribosomal_L32e	ECOD (1.6)
I [auth AF]	Ribosomal_L30_1	e4ujdAF1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30_1	ECOD (1.6)
EC [auth Cg]	DUF1899	e4ujdCg1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
DC [auth Cf]	Ribosomal_S27	e4ujdCf1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
CC [auth Ce]	Ribosomal_S30	e4ujdCe1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
BC [auth Cd]	Ribosomal_S14_2	e4ujdCd1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
H [auth AE]	Ribosomal_L6e	e4ujdAE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L6e	ECOD (1.6)
AC [auth Cc]	Ribosomal_S28e	e4ujdCc1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
ZB [auth Cb]	Ribosomal_S27e	e4ujdCb1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
YB [auth Ca]	Ribosomal_S26e	e4ujdCa1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
XB [auth CZ]	Ribosomal_S25	e4ujdCZ1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
WB [auth CY]	Ribosomal_S24e	e4ujdCY1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
VB [auth CX]	Ribosom_S12_S23	e4ujdCX1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
UB [auth CW]	Ribosomal_S8_N_1	e4ujdCW2	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
UB [auth CW]	Ribosomal_S8_C_1	e4ujdCW1	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
TB [auth CV]	Ribosomal_S21e	e4ujdCV1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
SB [auth CU]	Ribosomal_S10_1	e4ujdCU1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
RB [auth CT]	Ribosomal_S19e	e4ujdCT1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
G [auth AD]	Ribosomal_L5e	e4ujdAD1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L5e	ECOD (1.6)
QB [auth CS]	Ribosomal_S13	e4ujdCS1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
PB [auth CR]	Ribosomal_S17e	e4ujdCR1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
OB [auth CQ]	Ribosomal_S9	e4ujdCQ1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
NB [auth CP]	Ribosomal_S19	e4ujdCP1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
MB [auth CO]	Ribosomal_S11	e4ujdCO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
LB [auth CN]	Ribosomal_S13_N	e4ujdCN2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
LB [auth CN]	Ribosomal_S15_2	e4ujdCN1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
KB [auth CM]	Ribosomal_L7Ae	e4ujdCM1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
JB [auth CL]	Ribosomal_S17_1	e4ujdCL1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
IB [auth CK]	S10_plectin	e4ujdCK1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
HB [auth CJ]	S4	e4ujdCJ1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
F [auth AC]	Ribosomal_L4	e4ujdAC1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
F [auth AC]	Ribos_L4_asso_C	e4ujdAC2	A: extended segments	X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)	T: C-terminal helical region in 60S ribosomal protein L4 (L4p)	F: Ribos_L4_asso_C	ECOD (1.6)
GB [auth CI]	Ribosomal_S8e	e4ujdCI1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
FB [auth CH]	Ribosomal_S7e_N	e4ujdCH2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
FB [auth CH]	Ribosomal_S7e_C_1	e4ujdCH1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)
EB [auth CG]	Ribosomal_S6e	e4ujdCG1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
DB [auth CF]	Ribosomal_S7_1	e4ujdCF1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
CB [auth CE]	Ribosomal_S4e	e4ujdCE3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
CB [auth CE]	40S_S4_C	e4ujdCE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
CB [auth CE]	RS4NT	e4ujdCE2	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
BB [auth CD]	Ribosomal_S3_C	e4ujdCD1	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
BB [auth CD]	KH_2_3	e4ujdCD2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_C_1	e4ujdCC2	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_3	e4ujdCC3	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
AB [auth CC]	Ribosomal_S5_2	e4ujdCC1	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
ZA [auth CB]	Ribosomal_S3Ae_N	e4ujdCB2	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
ZA [auth CB]	Ribosomal_S3Ae_C	e4ujdCB1	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
YA [auth CA]	Ribosomal_S2_2	e4ujdCA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
E [auth AB]	Ribosomal_L3	e4ujdAB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
VA [auth BB]	GTP_EFTU_D2_2	e4ujdBB4	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D2_2	ECOD (1.6)
VA [auth BB]	GTP_EFTU_D4	e4ujdBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D4	ECOD (1.6)
VA [auth BB]	MnmE_helical_2nd	e4ujdBB3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
VA [auth BB]	IF-2	e4ujdBB2	A: a/b three-layered sandwiches	X: Initiation factor IF2/eIF5b, domain 3 (From Topology)	H: Initiation factor IF2/eIF5b, domain 3 (From Topology)	T: Initiation factor IF2/eIF5b, domain 3	F: IF-2	ECOD (1.6)
TA [auth Au]	Ribosomal_L1_2nd_1	e4ujdAu1	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: Ribosomal_L1_2nd_1	ECOD (1.6)
TA [auth Au]	Ribosomal_L1_1st_1	e4ujdAu2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Rossmann-like domain in Ribosomal protein L1 (From Topology)	T: Rossmann-like domain in Ribosomal protein L1	F: Ribosomal_L1_1st_1	ECOD (1.6)
SA [auth At]	Ribosomal_L28e	e4ujdAt1	A: a+b two layers	X: RPL28 (From Topology)	H: RPL28 (From Topology)	T: RPL28	F: Ribosomal_L28e	ECOD (1.6)
RA [auth Ap]	Ribosomal_L37ae	e4ujdAp1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37ae	ECOD (1.6)
QA [auth Ao]	Ribosomal_L44	e4ujdAo1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L44	ECOD (1.6)
PA [auth An]	Ribosomal_L41	e4ujdAn1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: Ribosomal_L41	ECOD (1.6)
OA [auth Am]	Ribosomal_L40e	e4ujdAm1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L40e	ECOD (1.6)
NA [auth Al]	Ribosomal_L39	e4ujdAl1	A: extended segments	X: Ribosomal protein L39e (From Topology)	H: Ribosomal protein L39e (From Topology)	T: Ribosomal protein L39e	F: Ribosomal_L39	ECOD (1.6)
D [auth AA]	Ribosomal_L2_1	e4ujdAA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
D [auth AA]	Ribosomal_L2_C_2	e4ujdAA2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C_2	ECOD (1.6)
MA [auth Ak]	Ribosomal_L38e	e4ujdAk1	A: a+b two layers	X: SRP9/14-like	H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)	T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related	F: Ribosomal_L38e	ECOD (1.6)
LA [auth Aj]	Ribosomal_L37e	e4ujdAj1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L37e	ECOD (1.6)
KA [auth Ai]	Ribosomal_L36e	e4ujdAi1	A: alpha arrays	X: 60S ribosomal protein rpL36 (L36e) (From Topology)	H: 60S ribosomal protein rpL36 (L36e) (From Topology)	T: 60S ribosomal protein rpL36 (L36e)	F: Ribosomal_L36e	ECOD (1.6)
JA [auth Ah]	Ribosomal_L29_2	e4ujdAh1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29_2	ECOD (1.6)
IA [auth Ag]	Ribosomal_L34e	e4ujdAg1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: RPL34 (From Topology)	T: RPL34	F: Ribosomal_L34e	ECOD (1.6)
HA [auth Af]	Ribosomal_L35Ae	e4ujdAf1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L35Ae	ECOD (1.6)
FA [auth Ad]	Ribosomal_L31e	e4ujdAd1	A: a+b two layers	X: Ribosomal protein L31e-like	H: Ribosomal protein L31e/gp120 outer domain (From Topology)	T: Ribosomal protein L31e/gp120 outer domain	F: Ribosomal_L31e	ECOD (1.6)
EA [auth Ac]	Ribosomal_L7Ae	e4ujdAc1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
DA [auth Ab]	Ribosomal_L29e	e4ujdAb1	A: extended segments	X: RPL29 (From Topology)	H: RPL29 (From Topology)	T: RPL29	F: Ribosomal_L29e	ECOD (1.6)
CA [auth Aa]	Ribosomal_L18	e4ujdAa1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
BA [auth AZ]	Ribosomal_L27e	e4ujdAZ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L27e	ECOD (1.6)
AA [auth AY]	Ribosomal_L26	e4ujdAY1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L26	ECOD (1.6)
Z [auth AX]	Ribosomal_L23_3	e4ujdAX1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_3	ECOD (1.6)
Y [auth AW]	Ribosomal_L24e	e4ujdAW1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_L24e	ECOD (1.6)
X [auth AV]	Ribosomal_L14	e4ujdAV1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
V [auth AT]	Ribosomal_L21e	e4ujdAT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L21e	ECOD (1.6)
U [auth AS]	Ribosomal_L18A	e4ujdAS2	A: a+b two layers	X: GP2-like	H: RplX-like (From Topology)	T: RplX-like	F: Ribosomal_L18A	ECOD (1.6)
T [auth AR]	Ribosomal_L19e_N	e4ujdAR2	A: alpha arrays	X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) N-terminal domain	F: Ribosomal_L19e_N	ECOD (1.6)
T [auth AR]	Ribosomal_L19e_C	e4ujdAR1	A: alpha bundles	X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)	T: Ribosomal protein L19 (L19e) C-terminal domain	F: Ribosomal_L19e_C	ECOD (1.6)
S [auth AQ]	Ribosomal_L18	e4ujdAQ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L18	ECOD (1.6)
R [auth AP]	Ribosomal_L22	e4ujdAP1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
Q [auth AO]	Ribosomal_L13	e4ujdAO1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
P [auth AN]	Ribosomal_L15e	e4ujdAN1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L15e	ECOD (1.6)
O [auth AM]	Ribosomal_L14e	e4ujdAM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L14e	ECOD (1.6)
N [auth AL]	Ribosomal_L13e	e4ujdAL1	A: extended segments	X: RPL13 (From Topology)	H: RPL13 (From Topology)	T: RPL13	F: Ribosomal_L13e	ECOD (1.6)
M [auth AJ]	Ribosomal_L5_C	e4ujdAJ1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
L [auth AI]	Ribosomal_L16	e4ujdAI1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
K [auth AH]	Ribosomal_L6_2	e4ujdAH1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_2	ECOD (1.6)
K [auth AH]	Ribosomal_L6	e4ujdAH2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
J [auth AG]	Ribosomal_L7Ae_1	e4ujdAG1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
VA [auth BB]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
VA [auth BB]	PF11987	Translation-initiation factor 2 (IF-2)	Translation-initiation factor 2	IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 pr ...	IF-2 is a translation initiator in each of the three main phylogenetic domains (Eukaryotes [1], Bacteria [2] and Archaea [3]). IF2 interacts with formylmethionine-tRNA, GTP, IF1, IF3 and both ribosomal subunits [2]. Through these interactions, IF2 promotes the binding of the initiator tRNA to the A site in the smaller ribosomal subunit and catalyses the hydrolysis of GTP following initiation-complex formation [2].	Domain
VA [auth BB]	PF14578	Elongation factor Tu domain 4 (GTP_EFTU_D4)	Elongation factor Tu domain 4	Elongation factor Tu consists of several structural domains, and this is usually the fourth.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
W [auth AU]	60S RIBOSOMAL PROTEIN L22	-	-	-
GA [auth Ae]	60S RIBOSOMAL PROTEIN L32	-	-	-
I [auth AF]	60S RIBOSOMAL PROTEIN L7	-	-	-
EC [auth Cg]	40S RIBOSOMAL PROTEIN RACK1	-	-	-
DC [auth Cf]	40S RIBOSOMAL PROTEIN ES31	-	-	-
CC [auth Ce]	40S RIBOSOMAL PROTEIN ES30	-	-	-
BC [auth Cd]	40S RIBOSOMAL PROTEIN US14	-	-	-
H [auth AE]	60S RIBOSOMAL PROTEIN L6	-	-	-
AC [auth Cc]	40S RIBOSOMAL PROTEIN ES28	-	-	-
ZB [auth Cb]	40S RIBOSOMAL PROTEIN ES27	-	-	-
YB [auth Ca]	40S RIBOSOMAL PROTEIN ES26	-	-	-
XB [auth CZ]	40S RIBOSOMAL PROTEIN ES25	-	-	-
WB [auth CY]	40S RIBOSOMAL PROTEIN ES24	-	-	-
VB [auth CX]	40S RIBOSOMAL PROTEIN US12	-	-	-
UB [auth CW]	40S RIBOSOMAL PROTEIN US8	-	-	-
TB [auth CV]	40S RIBOSOMAL PROTEIN ES21	-	-	-
SB [auth CU]	40S RIBOSOMAL PROTEIN US10	-	-	-
RB [auth CT]	40S RIBOSOMAL PROTEIN ES19	-	-	-
G [auth AD]	60S RIBOSOMAL PROTEIN L5	-	-	-
QB [auth CS]	40S RIBOSOMAL PROTEIN US13	-	-	-
PB [auth CR]	40S RIBOSOMAL PROTEIN ES17	-	-	-
OB [auth CQ]	40S RIBOSOMAL PROTEIN US9	-	-	-
NB [auth CP]	40S RIBOSOMAL PROTEIN US19	-	-	-
MB [auth CO]	40S RIBOSOMAL PROTEIN ES11	-	-	-
LB [auth CN]	40S RIBOSOMAL PROTEIN ES15	-	-	-
KB [auth CM]	40S RIBOSOMAL PROTEIN ES12	-	-	-
JB [auth CL]	40S RIBOSOMAL PROTEIN US17	-	-	-
IB [auth CK]	40S RIBOSOMAL PROTEIN ES10	-	-	-
HB [auth CJ]	40S RIBOSOMAL PROTEIN US4	-	-	-
F [auth AC]	60S RIBOSOMAL PROTEIN L4	-	-	-
GB [auth CI]	40S RIBOSOMAL PROTEIN ES8	-	-	-
FB [auth CH]	40S RIBOSOMAL PROTEIN ES7	-	-	-
EB [auth CG]	40S RIBOSOMAL PROTEIN ES6	-	-	-
DB [auth CF]	40S RIBOSOMAL PROTEIN US7	-	-	-
CB [auth CE]	40S RIBOSOMAL PROTEIN ES4	-	-	-
BB [auth CD]	40S RIBOSOMAL PROTEIN US3	-	-	-
AB [auth CC]	40S RIBOSOMAL PROTEIN US5	-	-	-
ZA [auth CB]	40S RIBOSOMAL PROTEIN ES1	-	-	-
YA [auth CA]	40S RIBOSOMAL PROTEIN US2	-	-	-
XA [auth C1]	18S Ribosomal RNA	-	-	-
E [auth AB]	60S RIBOSOMAL PROTEIN L3	-	-	-
WA [auth BC]	HCV-IRES	-	-	-
VA [auth BB]	EIF5B	translation factor activity translation initiation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding translation factor activity translation initiation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
UA [auth BA]	TRNA	-	-	-
TA [auth Au]	60S RIBOSOMAL PROTEIN L10A	-	-	-
SA [auth At]	60S RIBOSOMAL PROTEIN L28	-	-	-
RA [auth Ap]	60S RIBOSOMAL PROTEIN L37A	-	-	-
QA [auth Ao]	60S RIBOSOMAL PROTEIN L36A	-	-	-
PA [auth An]	60S RIBOSOMAL PROTEIN L41	-	-	-
OA [auth Am]	UBIQUITIN-60S RIBOSOMAL PROTEIN L40	-	-	-
NA [auth Al]	60S RIBOSOMAL PROTEIN L39	-	-	-
D [auth AA]	60S RIBOSOMAL PROTEIN L8	-	-	-
MA [auth Ak]	60S RIBOSOMAL PROTEIN L38	-	-	-
LA [auth Aj]	60S RIBOSOMAL PROTEIN L37	-	-	-
KA [auth Ai]	60S RIBOSOMAL PROTEIN L36	-	-	-
JA [auth Ah]	60S RIBOSOMAL PROTEIN L35	-	-	-
IA [auth Ag]	60S RIBOSOMAL PROTEIN L34	-	-	-
HA [auth Af]	60S RIBOSOMAL PROTEIN L35A	-	-	-
FA [auth Ad]	60S RIBOSOMAL PROTEIN L31	-	-	-
EA [auth Ac]	60S RIBOSOMAL PROTEIN L30	-	-	-
DA [auth Ab]	60S RIBOSOMAL PROTEIN L29	-	-	-
C [auth A4]	5S Ribosomal RNA	-	-	-
CA [auth Aa]	60S RIBOSOMAL PROTEIN L27A	-	-	-
BA [auth AZ]	60S RIBOSOMAL PROTEIN L27	-	-	-
AA [auth AY]	60S RIBOSOMAL PROTEIN L26	-	-	-
Z [auth AX]	60S RIBOSOMAL PROTEIN L23A	-	-	-
Y [auth AW]	60S RIBOSOMAL PROTEIN L24	-	-	-
X [auth AV]	60S RIBOSOMAL PROTEIN L23	-	-	-
V [auth AT]	60S RIBOSOMAL PROTEIN L21	-	-	-
U [auth AS]	60S RIBOSOMAL PROTEIN L18A	-	-	-
T [auth AR]	60S RIBOSOMAL PROTEIN L19	-	-	-
B [auth A3]	5.8S Ribosomal RNA	-	-	-
S [auth AQ]	60S RIBOSOMAL PROTEIN L18	-	-	-
R [auth AP]	60S RIBOSOMAL PROTEIN L17	-	-	-
Q [auth AO]	60S RIBOSOMAL PROTEIN L13A	-	-	-
P [auth AN]	60S RIBOSOMAL PROTEIN L15	-	-	-
O [auth AM]	60S RIBOSOMAL PROTEIN L14	-	-	-
N [auth AL]	60S RIBOSOMAL PROTEIN L13	-	-	-
M [auth AJ]	60S RIBOSOMAL PROTEIN L11	-	-	-
L [auth AI]	60S RIBOSOMAL PROTEIN L10	-	-	-
K [auth AH]	60S RIBOSOMAL PROTEIN L9	-	-	-
J [auth AG]	60S RIBOSOMAL PROTEIN L7A	-	-	-
A [auth A2]	28S Ribosomal RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
VA [auth BB]	IPR005225	Small GTP-binding domain	Domain
VA [auth BB]	IPR029459	Elongation factor Tu-type domain	Domain
VA [auth BB]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
VA [auth BB]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
VA [auth BB]	IPR015760	Translation initiation factor IF- 2	Family
VA [auth BB]	IPR036925	Translation initiation factor IF-2, domain 3 superfamily	Homologous Superfamily
VA [auth BB]	IPR023115	Translation initiation factor IF- 2, domain 3	Domain
VA [auth BB]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily