4XRU | pdb_00004xru

Structure of Pnkp1/Rnl/Hen1 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FEUF08395e4xruF1 A: a+b two layersX: Glutamine synthetase-likeH: Methyltransferase type 12 N-terminal domain (From Topology)T: Methyltransferase type 12 N-terminal domainF: EUF08395ECOD (1.6)
FMethyltransf_11_6e4xruF2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Methyltransf_11_6ECOD (1.6)
CEUF08395e4xruC2 A: a+b two layersX: Glutamine synthetase-likeH: Methyltransferase type 12 N-terminal domain (From Topology)T: Methyltransferase type 12 N-terminal domainF: EUF08395ECOD (1.6)
CMethyltransf_11_6e4xruC1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Methyltransf_11_6ECOD (1.6)
EPNKP_ligasee4xruE1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: PNKP_ligaseECOD (1.6)
BPNKP_ligasee4xruB1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: ATP-graspF: PNKP_ligaseECOD (1.6)
DAAA_33e4xruD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_33ECOD (1.6)
DPNK3Pe4xruD2 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: HAD-likeF: PNK3PECOD (1.6)
AAAA_33e4xruA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_33ECOD (1.6)
APNK3Pe4xruA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: HAD-likeF: PNK3PECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (utative)
C3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (utative)
D3.40.50.1000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold HAD superfamily/HAD-likeCATH (utative)
A3.40.50.1000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold HAD superfamily/HAD-likeCATH (utative)