5O61

The complete structure of the Mycobacterium smegmatis 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth E]SCOP2B SuperfamilyRibosomal protein L48080698 3001146 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyRL5-like8073880 3001709 SCOP2B (2022-06-29)
O [auth N]SCOP2B SuperfamilyRibosomal protein L16p/L10e8076049 3000884 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082427 3000334 SCOP2B (2022-06-29)
S [auth R]SCOP2B SuperfamilyRibosomal protein L208075008 3000563 SCOP2B (2022-06-29)
T [auth S]SCOP2B Superfamilyl21p-like8082445 3002005 SCOP2B (2022-06-29)
Y [auth X]SCOP2B SuperfamilyRibosomal L27 protein-like8075032 3000539 SCOP2B (2022-06-29)
Z [auth Y]SCOP2B SuperfamilyL28p-like8089398 3001966 SCOP2B (2022-06-29)
AA [auth Z]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8080678 3000713 SCOP2B (2022-06-29)
FA [auth e]SCOP2B SuperfamilyL35p-like8083338 3000790 SCOP2B (2022-06-29)
OA [auth BG]SCOP2B SuperfamilyRibosomal protein S78077977 3000799 SCOP2B (2022-06-29)
VA [auth BN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8059256 3000068 SCOP2B (2022-06-29)
CB [auth BV]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063840 3001397 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyRibosomal protein L138066067 3001134 SCOP2B (2022-06-29)
M [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like8072026 3000433 SCOP2B (2022-06-29)
N [auth M]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070563 3001045 SCOP2B (2022-06-29)
P [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L178089012 3000995 SCOP2B (2022-06-29)
U [auth T]SCOP2B SuperfamilyRibosomal protein L228081516 3001078 SCOP2B (2022-06-29)
V [auth U]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8077101 3000210 SCOP2B (2022-06-29)
W [auth V]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082509 3000334 SCOP2B (2022-06-29)
X [auth W]SCOP2B SuperfamilyRibosomal protein L25-like8082279 3001161 SCOP2B (2022-06-29)
BA [auth a]SCOP2B SuperfamilyRibosomal protein L30p/L7e8076279 3001378 SCOP2B (2022-06-29)
DA [auth c]SCOP2B SuperfamilyZn-binding ribosomal proteins8075054 3001320 SCOP2B (2022-06-29)
GA [auth f]SCOP2B SuperfamilyRibosomal protein L368083308 3001346 SCOP2B (2022-06-29)
HA [auth g]SCOP2B SuperfamilyL28p-like8086126 3001966 SCOP2B (2022-06-29)
LA [auth BD]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083402 3001473 SCOP2B (2022-06-29)
PA [auth BH]SCOP2B SuperfamilyRibosomal protein S88079055 3000709 SCOP2B (2022-06-29)
QA [auth BI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082671 3000100 SCOP2B (2022-06-29)
RA [auth BJ]SCOP2B SuperfamilyRibosomal protein S108096980 3001336 SCOP2B (2022-06-29)
SA [auth BK]SCOP2B SuperfamilyTranslational machinery components8096984 3000571 SCOP2B (2022-06-29)
TA [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins8096978 3000135 SCOP2B (2022-06-29)
UA [auth BM]SCOP2B SuperfamilyS13-like H2TH domain8096982 3000053 SCOP2B (2022-06-29)
WA [auth BO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8072635 3001284 SCOP2B (2022-06-29)
E [auth D]SCOP2B SuperfamilyTranslational proteins8089146 3000811 SCOP2B (2022-06-29)
YA [auth BQ]SCOP2B SuperfamilyNucleic acid-binding proteins8059280 3000135 SCOP2B (2022-06-29)
AB [auth BS]SCOP2B SuperfamilyRibosomal protein S198086054 3000686 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth E]Ribosomal_L4e5o61E1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth F]Ribosomal_L5_Ce5o61F1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
I [auth H]Ribosomal_L9_Ne5o61H2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth H]Ribosomal_L9_C_1e5o61H1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)
J [auth I]Ribosomal_L10e5o61I1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
K [auth J]Ribosomal_L11e5o61J2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
K [auth J]Ribosomal_L11_Ne5o61J1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
O [auth N]Ribosomal_L16e5o61N1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
R [auth Q]Ribosomal_L19e5o61Q1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
S [auth R]Ribosomal_L20e5o61R1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
T [auth S]Ribosomal_L21pe5o61S1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
Y [auth X]Ribosomal_L27e5o61X1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
Z [auth Y]Ribosomal_L28e5o61Y1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
AA [auth Z]Ribosomal_L29e5o61Z1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
FA [auth e]Ribosomal_L35pe5o61e1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NA [auth BF]Ribosomal_S6e5o61BF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
OA [auth BG]Ribosomal_S7_1e5o61BG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
VA [auth BN]Ribosomal_S14e5o61BN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
BB [auth BT]Ribosomal_S20pe5o61BT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
CB [auth BV]Ribosomal_S2e5o61BV1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
L [auth K]Ribosomal_L13e5o61K1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
M [auth L]Ribosomal_L14e5o61L1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
N [auth M]Ribosomal_L27Ae5o61M1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
P [auth O]Ribosomal_L17_1e5o61O1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
Q [auth P]Ribosomal_L18pe5o61P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
U [auth T]Ribosomal_L22e5o61T1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
V [auth U]Ribosomal_L23_2e5o61U1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
W [auth V]ribosomal_L24_1e5o61V1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
X [auth W]Ribosomal_L25pe5o61W2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
X [auth W]Ribosomal_TL5_C_1e5o61W1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_C_1ECOD (1.6)
BA [auth a]Ribosomal_L30e5o61a1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
CA [auth b]Ribosomal_L32pe5o61b1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
DA [auth c]Ribosomal_L33e5o61c1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
EA [auth d]Ribosomal_L34e5o61d1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
GA [auth f]Ribosomal_L36e5o61f1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
HA [auth g]Ribosomal_L31e5o61g1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
KA [auth BC]Ribosomal_S3_Ce5o61BC2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KA [auth BC]KH_2_1e5o61BC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
LA [auth BD]S4e5o61BD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
MA [auth BE]Ribosomal_S5_Ce5o61BE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MA [auth BE]Ribosomal_S5e5o61BE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
D [auth C]Ribosomal_L2_1e5o61C1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth C]Ribosomal_L2_Ce5o61C2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
PA [auth BH]Ribosomal_S8_Ne5o61BH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PA [auth BH]Ribosomal_S8_Ce5o61BH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
QA [auth BI]Ribosomal_S9e5o61BI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
RA [auth BJ]Ribosomal_S10e5o61BJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
SA [auth BK]Ribosomal_S11e5o61BK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
TA [auth BL]Ribosom_S12_S23e5o61BL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
UA [auth BM]Ribosomal_S13_1e5o61BM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
WA [auth BO]Ribosomal_S15_1e5o61BO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
E [auth D]Ribosomal_L3e5o61D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth BP]Ribosomal_S16_1e5o61BP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
YA [auth BQ]Ribosomal_S17_1e5o61BQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
ZA [auth BR]Ribosomal_S18e5o61BR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
AB [auth BS]Ribosomal_S19e5o61BS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
H [auth G]Ribosomal_L6e5o61G1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
H [auth G]Ribosomal_L6_1e5o61G2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
G [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
I [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
I [auth H]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
J [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
K [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
K [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
O [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
R [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
S [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
T [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
Y [auth X]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
Z [auth Y]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
AA [auth Z]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
FA [auth e]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
OA [auth BG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
VA [auth BN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
BB [auth BT]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
CB [auth BV]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
L [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
M [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
N [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
P [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
Q [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
U [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
V [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
W [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
W [auth V]PF00467KOW motif (KOW)KOW motif- Family
X [auth W]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
X [auth W]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
BA [auth a]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
CA [auth b]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
DA [auth c]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
EA [auth d]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
GA [auth f]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
HA [auth g]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
JA [auth BB]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
KA [auth BC]PF07650KH domain (KH_2)KH domain- Domain
KA [auth BC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
LA [auth BD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
LA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth BE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
MA [auth BE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
D [auth C]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth C]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PA [auth BH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
QA [auth BI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RA [auth BJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
SA [auth BK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
TA [auth BL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
UA [auth BM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth BO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
E [auth D]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
XA [auth BP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
YA [auth BQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
ZA [auth BR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
AB [auth BS]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
H [auth G]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth E]50S ribosomal protein L4
G [auth F]50S ribosomal protein L5
I [auth H]50S ribosomal protein L9
J [auth I]50S ribosomal protein L10
K [auth J]50S ribosomal protein L11
O [auth N]50S ribosomal protein L16
R [auth Q]50S ribosomal protein L19
S [auth R]50S ribosomal protein L20
T [auth S]50S ribosomal protein L21
Y [auth X]50S ribosomal protein L27
Z [auth Y]LSU ribosomal protein L28P
AA [auth Z]50S ribosomal protein L29
FA [auth e]50S ribosomal protein L35
IA [auth BA]16S rRNA---
NA [auth BF]30S ribosomal protein S6---
OA [auth BG]30S ribosomal protein S7
VA [auth BN]30S ribosomal protein S14 type Z
BB [auth BT]30S ribosomal protein S20
CB [auth BV]30S ribosomal protein S2
EB [auth BX]mRNA fragment---
A [auth 3]50S ribosomal protein bL37- - -
L [auth K]50S ribosomal protein L13
M [auth L]50S ribosomal protein L14
N [auth M]50S ribosomal protein L15
P [auth O]50S ribosomal protein L17
Q [auth P]50S ribosomal protein L18
B [auth A]23S rRNA---
U [auth T]50S ribosomal protein L22
V [auth U]50S ribosomal protein L23
W [auth V]50S ribosomal protein L24
X [auth W]50S ribosomal protein L25
BA [auth a]50S ribosomal protein L30
CA [auth b]50S ribosomal protein L32
C [auth B]5S rRNA---
DA [auth c]50S ribosomal protein L33 1
EA [auth d]50S ribosomal protein L34
GA [auth f]50S ribosomal protein L36
HA [auth g]50S ribosomal protein L31
JA [auth BB]Conserved domain protein- - -
KA [auth BC]30S ribosomal protein S3
LA [auth BD]30S ribosomal protein S4
MA [auth BE]30S ribosomal protein S5
D [auth C]50S ribosomal protein L2
PA [auth BH]30S ribosomal protein S8
QA [auth BI]30S ribosomal protein S9
RA [auth BJ]30S ribosomal protein S10
SA [auth BK]30S ribosomal protein S11
TA [auth BL]30S ribosomal protein S12
UA [auth BM]30S ribosomal protein S13
WA [auth BO]30S ribosomal protein S15
E [auth D]50S ribosomal protein L3
XA [auth BP]30S ribosomal protein S16
YA [auth BQ]30S ribosomal protein S17
ZA [auth BR]30S ribosomal protein S18 2
AB [auth BS]30S ribosomal protein S19
DB [auth BW]P/P-site Phe-tRNA(Phe)---
H [auth G]50S ribosomal protein L6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
F [auth E]IPR002136Large ribosomal subunit protein uL4Family
F [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
G [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
G [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
G [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
G [auth F]IPR002132Large ribosomal subunit protein uL5Family
I [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
I [auth H]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
I [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
I [auth H]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
I [auth H]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
I [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
I [auth H]IPR000244Large ribosomal subunit protein bL9Family
J [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
J [auth I]IPR001790Large ribosomal subunit protein uL10Family
J [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
J [auth I]IPR022973Large ribosomal subunit protein uL10, bacterialFamily
J [auth I]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
K [auth J]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
K [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
K [auth J]IPR000911Ribosomal protein uL11Family
K [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
K [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
K [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
K [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
O [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
O [auth N]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
O [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
O [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
O [auth N]IPR047873Large ribosomal subunit protein uL16Family
R [auth Q]IPR001857Large ribosomal subunit protein bL19Family
R [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
R [auth Q]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
R [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
S [auth R]IPR005813Large ribosomal subunit protein bL20Family
T [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
T [auth S]IPR001787Large ribosomal subunit protein bL21Family
T [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
T [auth S]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
Y [auth X]IPR001684Large ribosomal subunit protein bL27Family
Y [auth X]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
Z [auth Y]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
Z [auth Y]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
Z [auth Y]IPR026569Large ribosomal subunit protein bL28Family
Z [auth Y]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth Z]IPR001854Large ribosomal subunit protein uL29Family
AA [auth Z]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
AA [auth Z]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
FA [auth e]IPR021137Large ribosomal subunit protein bL35-likeFamily
FA [auth e]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
FA [auth e]IPR001706Large ribosomal subunit protein bL35Family
FA [auth e]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
OA [auth BG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OA [auth BG]IPR000235Small ribosomal subunit protein uS7Family
OA [auth BG]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
OA [auth BG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OA [auth BG]IPR023798Small ribosomal subunit protein uS7 domainDomain
VA [auth BN]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
VA [auth BN]IPR001209Small ribosomal subunit protein uS14Family
VA [auth BN]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
VA [auth BN]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
BB [auth BT]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
BB [auth BT]IPR002583Small ribosomal subunit protein bS20Family
CB [auth BV]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
CB [auth BV]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
CB [auth BV]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
CB [auth BV]IPR001865Small ribosomal subunit protein uS2Family
L [auth K]IPR005822Large ribosomal subunit protein uL13Family
L [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
M [auth L]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
M [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth L]IPR000218Large ribosomal subunit protein uL14Family
M [auth L]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
N [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
N [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
N [auth M]IPR030878Large ribosomal subunit protein uL15Family
N [auth M]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
N [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
P [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
P [auth O]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
P [auth O]IPR000456Large ribosomal subunit protein bL17Family
Q [auth P]IPR005484Large ribosomal subunit protein uL18Family
Q [auth P]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
U [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
U [auth T]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth T]IPR001063Large ribosomal subunit protein uL22Family
U [auth T]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
V [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
V [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
V [auth U]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
V [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth V]IPR003256Large ribosomal subunit protein uL24Family
W [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth V]IPR005824KOWDomain
W [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
X [auth W]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
X [auth W]IPR001021Ribosomal protein bL25, long-formFamily
X [auth W]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
X [auth W]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
X [auth W]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
X [auth W]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
BA [auth a]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BA [auth a]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
BA [auth a]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BA [auth a]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
CA [auth b]IPR002677Large ribosomal subunit protein bL32Family
CA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth c]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
DA [auth c]IPR001705Large ribosomal subunit protein bL33Family
DA [auth c]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EA [auth d]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
EA [auth d]IPR000271Large ribosomal subunit protein bL34Family
GA [auth f]IPR000473Large ribosomal subunit protein bL36Family
GA [auth f]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
HA [auth g]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
HA [auth g]IPR027491Large ribosomal subunit protein bL31 type AFamily
HA [auth g]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
HA [auth g]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
JA [auth BB]IPR013177Ribosomal protein mS38, C-terminalDomain
KA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
KA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
KA [auth BC]IPR004087K Homology domainDomain
KA [auth BC]IPR004044K Homology domain, type 2Domain
KA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
KA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
KA [auth BC]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
KA [auth BC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
LA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
LA [auth BD]IPR002942RNA-binding S4 domainDomain
LA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
LA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
LA [auth BD]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
LA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
MA [auth BE]IPR000851Small ribosomal subunit protein uS5Family
MA [auth BE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
MA [auth BE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
MA [auth BE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth BE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
MA [auth BE]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
MA [auth BE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth C]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth C]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth C]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth C]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
D [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth C]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth C]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth C]IPR002171Large ribosomal subunit protein uL2Family
PA [auth BH]IPR000630Small ribosomal subunit protein uS8Family
PA [auth BH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
PA [auth BH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth BI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth BI]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
QA [auth BI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth BI]IPR000754Small ribosomal subunit protein uS9Family
QA [auth BI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth BJ]IPR001848Small ribosomal subunit protein uS10Family
RA [auth BJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
RA [auth BJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RA [auth BJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
SA [auth BK]IPR001971Small ribosomal subunit protein uS11Family
SA [auth BK]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
SA [auth BK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
SA [auth BK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
TA [auth BL]IPR006032Small ribosomal subunit protein uS12Family
TA [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth BL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
UA [auth BM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UA [auth BM]IPR001892Small ribosomal subunit protein uS13Family
UA [auth BM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UA [auth BM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth BM]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
WA [auth BO]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
WA [auth BO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WA [auth BO]IPR000589Small ribosomal subunit protein uS15Family
E [auth D]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth D]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
E [auth D]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth D]IPR000597Large ribosomal subunit protein uL3Family
XA [auth BP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
XA [auth BP]IPR000307Small ribosomal subunit protein bS16Family
XA [auth BP]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
YA [auth BQ]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
YA [auth BQ]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
YA [auth BQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth BQ]IPR000266Small ribosomal subunit protein uS17Family
ZA [auth BR]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth BR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
ZA [auth BR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AB [auth BS]IPR002222Small ribosomal subunit protein uS19Family
AB [auth BS]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
AB [auth BS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AB [auth BS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
H [auth G]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
H [auth G]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
H [auth G]IPR000702Large ribosomal subunit protein uL6-likeFamily
H [auth G]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
H [auth G]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site