5O7F | pdb_00005o7f

Structure of the inactive T.maritima PDE (TM1595) D80N D154N mutant with GMP and Mn2+

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADHHA1_1e5o7fA1 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: DHHA1_1ECOD (1.6)
ADHHe5o7fA2 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: DHHECOD (1.6)
BDHHA1_1e5o7fB2 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: DHHA1_1ECOD (1.6)
BDHHe5o7fB1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: DHHECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02272DHHA1 domain (DHHA1)DHHA1 domainThis domain is often found adjacent to the DHH domain Pfam:PF01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members [1]. This domain is also found in alanyl tRNA synthetase e.g. Swiss:P00957, suggest ...This domain is often found adjacent to the DHH domain Pfam:PF01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members [1]. This domain is also found in alanyl tRNA synthetase e.g. Swiss:P00957, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Domain
A, B
PF01368DHH family, N-terminal domain (DHH)DHH family, N-terminal domainIt is predicted that this family of proteins all perform a phosphoesterase function. This domain is found at the N-terminal of the single stranded DNA exonuclease RecJ. It shows an alpha-beta configuration [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
phosphodiesterase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR051319Bifunctional oligoribonuclease/pAp-phosphatase and c-di-AMP PDEFamily
A, B
IPR001667DDH domainDomain
A, B
IPR038763DHH phosphoesterase superfamilyHomologous Superfamily
A, B
IPR003156DHHA1 domainDomain