5W2F | pdb_00005w2f

Crystal Structure of the C-terminal Domain of Human eIF2D at 1.4 A resolution

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e5w2fA2	A: alpha arrays	X: SWIB/MDM2 domain (From Topology)	H: SWIB/MDM2 domain (From Topology)	T: SWIB/MDM2 domain	F: UNK_F_TYPE	ECOD (1.6)
A	SUI1	e5w2fA1	A: a+b two layers	X: Glucose permease domain IIB-like	H: eIF1-like (From Topology)	T: eIF1-like	F: SUI1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.780.10	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor Eif1	SUI1-like domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01253	Translation initiation factor SUI1 (SUI1)	Translation initiation factor SUI1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Eukaryotic translation initiation factor 2D	translation factor activity translation initiation factor activity molecular transducer activity signaling receptor activity RNA binding binding nucleic acid binding	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport ribonucleoprotein complex biogenesis cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process formation of translation preinitiation complex viral gene expression viral process viral translation IRES-dependent viral translational initiation cellular component disassembly organelle organization organelle disassembly ribosome disassembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen organelle membraneless organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015947	PUA-like superfamily	Homologous Superfamily
A	IPR036885	SWIB/MDM2 domain superfamily	Homologous Superfamily
A	IPR048247	Eukaryotic translation initiation factor 2D, N-terminal domain	Domain
A	IPR039757	Eukaryotic translation initiation factor 2D	Family
A	IPR001950	SUI1 domain	Domain
A	IPR048248	Eukaryotic translation initiation factor 2D-like, PUA RNA-binding domain	Domain
A	IPR041366	Pre-PUA domain	Domain
A	IPR036877	SUI1 domain superfamily	Homologous Superfamily
A	IPR003121	SWIB/MDM2 domain	Domain
A	IPR039759	Eukaryotic translation initiation factor 2D, SUI1 domain	Domain
A	IPR002478	PUA domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P41214	large cell medulloblastoma pancreatic ductal adenocarcinoma osteosarcoma ovarian cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.