6MAS | pdb_00006mas

X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10G

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6masa_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
B	d6masb_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
C	d6masc_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
D	d6masd_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
E	d6mase_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
F	d6masf_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
G	d6masg_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)
H	d6mash_	Alpha and beta proteins (a+b)	GFP-like	GFP-like	automated matches	automated matches	Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	GFP-like	8097410	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GFP	e6masA1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
B	GFP	e6masB1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
C	GFP	e6masC1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
D	GFP	e6masD1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
E	GFP	e6masE1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
F	GFP	e6masF1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
G	GFP	e6masG1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
H	GFP	e6masH1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF01353	Green fluorescent protein (GFP)	Green fluorescent protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Uncharacterized protein	-	bioluminescence metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011584	Green fluorescent protein-related	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR009017	Green fluorescent protein	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.