6TMG | pdb_00006tmg

Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, membrane region model

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
TA [auth F], V [auth f]	PF00085	Thioredoxin (Thioredoxin)	Thioredoxin	Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.	Domain
MA [auth P], O [auth p]	PF20716	ATPTG10-like (ATPTG10)	ATPTG10-like	This entry, previously known as DUF6828, represents a domain found in the T. gondii ATP synthase subunit 10 (ATPTG10) and related proteins from Apicomplexan species. This domain adopts an alpha-helical structure consisting of five helices [1]. It con ...	This entry, previously known as DUF6828, represents a domain found in the T. gondii ATP synthase subunit 10 (ATPTG10) and related proteins from Apicomplexan species. This domain adopts an alpha-helical structure consisting of five helices [1]. It contains two highly conserved sequence motifs: FSWxD and MxLWI/LKxRI/L. The formation of the T.gondii ATP synthase hexamer involves two contact sites in the lumenal region. ATPTG10 contributes to the the second site via interaction with ATP synthase subunit 11 (ATPTG11).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
GA [auth U], I [auth u]	ATPTG15	-	-	cellular anatomical structure membrane
FA [auth S], H [auth s]	ATPTG13	-	-	-
EA [auth J], G [auth j]	subunit i/j	-	-	cellular anatomical structure membrane
DA [auth K], F [auth k]	subunit a	-	-	cellular anatomical structure membrane
CA [auth O], E [auth o]	subunit k	-	-	-
BA [auth G], D [auth g]	ATPTG5	-	-	-
AA [auth T], C [auth t]	ATPTG14	-	-	-
VA [auth A], X [auth a]	subunit d	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	ribose phosphate metabolic process ATP metabolic process ATP biosynthetic process nucleotide biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process purine ribonucleoside triphosphate biosynthetic process proton motive force-driven ATP synthesis nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process ribonucleotide metabolic process purine nucleoside triphosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process ribose phosphate metabolic process ATP metabolic process ATP biosynthetic process nucleotide biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process purine ribonucleoside triphosphate biosynthetic process proton motive force-driven ATP synthesis nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process ribonucleotide metabolic process purine nucleoside triphosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process small molecule metabolic process phosphorus metabolic process ribose phosphate biosynthetic process nucleoside phosphate metabolic process carbohydrate derivative biosynthetic process purine nucleoside triphosphate metabolic process nucleoside triphosphate biosynthetic process primary metabolic process nucleotide metabolic process nucleobase-containing compound biosynthetic process ribonucleoside triphosphate biosynthetic process purine-containing compound metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process cellular process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process purine nucleotide biosynthetic process	respiratory chain complex protein-containing complex catalytic complex proton-transporting ATP synthase complex membrane membrane protein complex cation channel complex transporter complex cellular anatomical structure proton-transporting two-sector ATPase complex transmembrane transporter complex monoatomic ion channel complex
UA [auth W], W [auth w]	ATPTG16	-	-	-
TA [auth F], V [auth f]	ATPTG4	-	-	-
SA [auth N], U [auth n]	ATPTG9	-	-	-
RA [auth M], T [auth m]	subunit 8	-	-	-
B [auth i], Z [auth I]	ATPTG7	-	-	-
QA [auth D], S [auth d]	ATPTG2	-	-	-
PA [auth C], R [auth c]	ATPTG1	binding tetrapyrrole binding heme binding electron transfer activity cation binding ion binding metal ion binding small molecule binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, ubiquinol to cytochrome c respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane
OA [auth L], Q [auth l]	ATPTG8	-	-	-
NA [auth V], P [auth v]	subunit f	-	-	-
MA [auth P], O [auth p]	ATPTG10	-	-	-
LA [auth R], N [auth r]	ATPTG12	-	-	-
KA [auth B], M [auth b]	subunit b	-	-	-
JA [auth X], L [auth x]	ATPTG17	-	-	-
IA [auth E], K [auth e]	ATPTG3	-	-	-
HA [auth H], J [auth h]	ATPTG6	-	-	-
A [auth q], Y [auth Q]	ATPTG11	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
VA [auth A], X [auth a]	IPR036228	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	Homologous Superfamily
TA [auth F], V [auth f]	IPR013766	Thioredoxin domain	Domain
TA [auth F], V [auth f]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
RA [auth M], T [auth m]	IPR056324	Microprotein domain, apicomplexa 19	Domain
PA [auth C], R [auth c]	IPR036909	Cytochrome c-like domain superfamily	Homologous Superfamily
PA [auth C], R [auth c]	IPR002326	Cytochrome c1	Family
PA [auth C], R [auth c]	IPR009056	Cytochrome c-like domain	Domain
PA [auth C], R [auth c]	IPR021157	Cytochrome c1, transmembrane anchor, C-terminal	Homologous Superfamily
MA [auth P], O [auth p]	IPR049262	ATPTG10-like domain	Domain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
DA [auth K], EA [auth J], F [auth k], G [auth j], GA [auth U] DA [auth K], EA [auth J], F [auth k], G [auth j], GA [auth U], I [auth u], JA [auth X], L [auth x], PA [auth C], R [auth c]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	F-type ATPase	F₁F_o ATP synthase hexamer, composite model