6Y7B | pdb_00006y7b

X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-carbopyronine fluorophore substrate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6y7ba1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Haloalkane dehalogenase	automated matches	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
A	d6y7ba3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
A	d6y7ba2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
B	d6y7bb1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Haloalkane dehalogenase	automated matches	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
B	d6y7bb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
B	d6y7bb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
C	d6y7bc1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Haloalkane dehalogenase	automated matches	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
C	d6y7bc3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
C	d6y7bc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
D	d6y7bd1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Haloalkane dehalogenase	automated matches	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
D	d6y7bd3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
D	d6y7bd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
E	d6y7be1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Haloalkane dehalogenase	automated matches	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
E	d6y7be3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)
E	d6y7be2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Rhodococcus sp. (in: high G+C Gram-positive bacteria) ) [TaxId: 1831 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Hydrolase_4_1	e6y7bA1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
B	Hydrolase_4_1	e6y7bB1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
C	Hydrolase_4_1	e6y7bC1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
D	Hydrolase_4_1	e6y7bD1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
E	Hydrolase_4_1	e6y7bE1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (utative)
B	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (utative)
C	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (utative)
D	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (utative)
E	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF00561	alpha/beta hydrolase fold (Abhydrolase_1)	alpha/beta hydrolase fold	This catalytic domain is found in a very wide range of enzymes.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Haloalkane dehalogenase	haloalkane dehalogenase activity hydrolase activity, acting on acid halide bonds hydrolase activity hydrolase activity, acting on acid halide bonds, in C-halide compounds catalytic activity	response to stimulus response to chemical response to toxic substance	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR000639	Epoxide hydrolase-like	Family
A, B, C, D, E	IPR000073	Alpha/beta hydrolase fold-1	Domain
A, B, C, D, E	IPR023594	Haloalkane dehalogenase, subfamily 2	Family
A, B, C, D, E	IPR050266	AB hydrolase superfamily	Family
A, B, C, D, E	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.