6ZCH | pdb_00006zch

Amyloid fibril morphology II (ex vivo) from murine SAA1.1 protein.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth I]	SAA	e6zchI1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
B [auth J]	SAA	e6zchJ1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
C [auth H]	SAA	e6zchH1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
D [auth F]	SAA	e6zchF1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
E [auth G]	SAA	e6zchG1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
F [auth E]	SAA	e6zchE1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
G [auth C]	SAA	e6zchC1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
H [auth D]	SAA	e6zchD1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
I [auth B]	SAA	e6zchB1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
J [auth A]	SAA	e6zchA1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
K [auth L]	SAA	e6zchL1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
L [auth M]	SAA	e6zchM1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
M [auth K]	SAA	e6zchK1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
N [auth O]	SAA	e6zchO1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
O [auth P]	SAA	e6zchP1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
P [auth N]	SAA	e6zchN1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
Q [auth R]	SAA	e6zchR1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)
R [auth Q]	SAA	e6zchQ1	A: alpha arrays	X: Serum amyloid A-1 protein (From Topology)	H: Serum amyloid A-1 protein (From Topology)	T: Serum amyloid A-1 protein	F: SAA	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], F [auth E], G [auth C], H [auth D], I [auth B], J [auth A], K [auth L], L [auth M], M [auth K], N [auth O], O [auth P], P [auth N], Q [auth R], R [auth Q]	PF00277	Serum amyloid A protein (SAA)	Serum amyloid A protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], F [auth E], G [auth C], H [auth D], I [auth B], J [auth A], K [auth L], L [auth M], M [auth K], N [auth O], O [auth P], P [auth N], Q [auth R], R [auth Q]	Serum amyloid A-2 protein	-	response to stimulus response to chemical response to stilbenoid acute-phase response defense response response to stress inflammatory response acute inflammatory response	protein-containing complex cellular anatomical structure extracellular region plasma lipoprotein particle high-density lipoprotein particle extracellular space lipoprotein particle protein-lipid complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], F [auth E], G [auth C], H [auth D], I [auth B], J [auth A], K [auth L], L [auth M], M [auth K], N [auth O], O [auth P], P [auth N], Q [auth R], R [auth Q]	IPR000096	Serum amyloid A protein	Family
A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], A [auth I], B [auth J], C [auth H], D [auth F], E [auth G], F [auth E], G [auth C], H [auth D], I [auth B], J [auth A], K [auth L], L [auth M], M [auth K], N [auth O], O [auth P], P [auth N], Q [auth R], R [auth Q]	IPR052464	Synovial Proliferation Regulator	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.