7C7D | pdb_00007c7d

Crystal structure of the catalytic unit of thermostable GH87 alpha-1,3-glucanase from Streptomyces thermodiastaticus strain HF3-3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACBM_35e7c7dA2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: CBM_35ECOD (1.6)
AGlyco_hydro_120e7c7dA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Glyco_hydro_120ECOD (1.6)
BCBM_35e7c7dB2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: CBM_35ECOD (1.6)
BGlyco_hydro_120e7c7dB1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Glyco_hydro_120ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF12708Rhamnogalacturonase A/epimerase, pectate lyase-like (Pect-lyase_RHGA_epim)Rhamnogalacturonase A/epimerase, pectate lyase-like- Repeat
A, B
PF22815Alpha-1,3-glucanase catalytic domain D1 (CatAgl_D1)Alpha-1,3-glucanase catalytic domain D1This entry represents a domain found in the homologues of Alpha-1,3-glucanase. This domain is found N-terminal in the catalytic domain (CatAgl-FH1). It folds into a beta-sandwich that bears similarity to CBM35 domains and is thought to possess carboh ...This entry represents a domain found in the homologues of Alpha-1,3-glucanase. This domain is found N-terminal in the catalytic domain (CatAgl-FH1). It folds into a beta-sandwich that bears similarity to CBM35 domains and is thought to possess carbohydrate-binding function [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
alpha-1,3-glucanase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006626Parallel beta-helix repeatRepeat
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR033801CBM6/CBM35/CBM36-like 1Domain
A, B
IPR000421Coagulation factor 5/8, C-terminal domainDomain
A, B
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
A, B
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, B
IPR024535Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domainDomain
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily