7FFE | pdb_00007ffe

Cryo-EM structure of VEEV VLP

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Trypsin-like serine proteases	8044424	3000114	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	Trypsin-like serine proteases	8044424	3000114	SCOP2B (2022-06-29)
H [auth K]	SCOP2B Superfamily	Trypsin-like serine proteases	8044424	3000114	SCOP2B (2022-06-29)
O [auth S]	SCOP2B Superfamily	Trypsin-like serine proteases	8044424	3000114	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_S3	e7ffeA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Peptidase_S3	ECOD (1.6)
D [auth F]	Peptidase_S3	e7ffeF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Peptidase_S3	ECOD (1.6)
H [auth K]	Peptidase_S3	e7ffeK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Peptidase_S3	ECOD (1.6)
O [auth S]	Peptidase_S3	e7ffeS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Peptidase_S3	ECOD (1.6)
B	Alpha_E1_glycop_2nd	e7ffeB2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Alpha_E1_glycop_2nd	ECOD (1.6)
B	Alpha_E1_glycop_1st	e7ffeB1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Alpha_E1_glycop_1st	ECOD (1.6)
B	Alpha_E1_glycop_like	e7ffeB3	A: extended segments	X: Transmembrane helix of E1 envelope glycoprotein (From Topology)	H: Transmembrane helix of E1 envelope glycoprotein (From Topology)	T: Transmembrane helix of E1 envelope glycoprotein	F: Alpha_E1_glycop_like	ECOD (1.6)
C	Alpha_E1_glycop_2nd	e7ffeC2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Alpha_E1_glycop_2nd	ECOD (1.6)
C	Alpha_E1_glycop_1st	e7ffeC1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Alpha_E1_glycop_1st	ECOD (1.6)
C	Alpha_E1_glycop_like	e7ffeC3	A: extended segments	X: Transmembrane helix of E1 envelope glycoprotein (From Topology)	H: Transmembrane helix of E1 envelope glycoprotein (From Topology)	T: Transmembrane helix of E1 envelope glycoprotein	F: Alpha_E1_glycop_like	ECOD (1.6)
E [auth G]	Alpha_E1_glycop_2nd	e7ffeG2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Alpha_E1_glycop_2nd	ECOD (1.6)
E [auth G]	Alpha_E1_glycop_1st	e7ffeG1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Alpha_E1_glycop_1st	ECOD (1.6)
E [auth G]	Alpha_E1_glycop_like	e7ffeG3	A: extended segments	X: Transmembrane helix of E1 envelope glycoprotein (From Topology)	H: Transmembrane helix of E1 envelope glycoprotein (From Topology)	T: Transmembrane helix of E1 envelope glycoprotein	F: Alpha_E1_glycop_like	ECOD (1.6)
K [auth O]	Alpha_E1_glycop_2nd	e7ffeO2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Alpha_E1_glycop_2nd	ECOD (1.6)
K [auth O]	Alpha_E1_glycop_1st	e7ffeO1	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Alpha_E1_glycop_1st	ECOD (1.6)
K [auth O]	Alpha_E1_glycop_like	e7ffeO3	A: extended segments	X: Transmembrane helix of E1 envelope glycoprotein (From Topology)	H: Transmembrane helix of E1 envelope glycoprotein (From Topology)	T: Transmembrane helix of E1 envelope glycoprotein	F: Alpha_E1_glycop_like	ECOD (1.6)
F [auth I]	Alpha_E3_glycop	e7ffeI1	A: a+b two layers	X: Glycoprotein E3 (From Topology)	H: Glycoprotein E3 (From Topology)	T: Glycoprotein E3	F: Alpha_E3_glycop	ECOD (1.6)
I [auth L]	Alpha_E3_glycop	e7ffeL1	A: a+b two layers	X: Glycoprotein E3 (From Topology)	H: Glycoprotein E3 (From Topology)	T: Glycoprotein E3	F: Alpha_E3_glycop	ECOD (1.6)
L [auth P]	Alpha_E3_glycop	e7ffeP1	A: a+b two layers	X: Glycoprotein E3 (From Topology)	H: Glycoprotein E3 (From Topology)	T: Glycoprotein E3	F: Alpha_E3_glycop	ECOD (1.6)
P [auth T]	Alpha_E3_glycop	e7ffeT1	A: a+b two layers	X: Glycoprotein E3 (From Topology)	H: Glycoprotein E3 (From Topology)	T: Glycoprotein E3	F: Alpha_E3_glycop	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, D [auth F], H [auth K], O [auth S]	PF00944	Alphavirus core protein (Peptidase_S3)	Alphavirus core protein	Also known as coat protein C and capsid protein C. This makes the literature very confusing. Alphaviruses consist of a nucleoprotein core, a lipid membrane which envelopes the core, and glycoprotein spikes protruding from the lipid membrane.	Domain
B, C, E [auth G], K [auth O]	PF01589	Alphavirus E1 glycoprotein (Alpha_E1_glycop)	Alphavirus E1 glycoprotein	-	Family
F [auth I], I [auth L], L [auth P], P [auth T]	PF01563	Alphavirus E3 glycoprotein (Alpha_E3_glycop)	Alphavirus E3 glycoprotein	-	Family
G [auth J], J [auth N], M [auth Q], N [auth R]	PF00943	Alphavirus E2 glycoprotein (Alpha_E2_glycop)	Alphavirus E2 glycoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, D [auth F], H [auth K], O [auth S]	Capsid protein	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity RNA binding binding nucleic acid binding structural molecule activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway import into cell receptor-mediated endocytosis of virus by host cell transport viral life cycle establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host intracellular membrane-bounded organelle host cell nucleus host intracellular organelle viral membrane viral envelope
B, C, E [auth G], K [auth O]	Spike glycoprotein E1	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity RNA binding binding nucleic acid binding structural molecule activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway import into cell receptor-mediated endocytosis of virus by host cell transport viral life cycle establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host intracellular membrane-bounded organelle host cell nucleus host intracellular organelle viral membrane viral envelope
F [auth I], I [auth L], L [auth P], P [auth T]	assembly protein E3	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity RNA binding binding nucleic acid binding structural molecule activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway import into cell receptor-mediated endocytosis of virus by host cell transport viral life cycle establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host intracellular membrane-bounded organelle host cell nucleus host intracellular organelle viral membrane viral envelope
G [auth J], J [auth N], M [auth Q], N [auth R]	Spike glycoprotein E2	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity RNA binding binding nucleic acid binding structural molecule activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host signal transduction pathway symbiont-mediated suppression of host toll-like receptor signaling pathway symbiont-mediated perturbation of host signal transduction pathway import into cell receptor-mediated endocytosis of virus by host cell transport viral life cycle establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host intracellular membrane-bounded organelle host cell nucleus host intracellular organelle viral membrane viral envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, D [auth F], H [auth K], O [auth S]	IPR002533	Alphavirus E3 spike glycoprotein	Domain
A, D [auth F], H [auth K], O [auth S]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR042304	Alphavirus E2 glycoprotein, domain A	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR042305	Alphavirus E2 glycoprotein, domain B	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR042306	Alphavirus E2 glycoprotein, domain C	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR000936	Alphavirus E2 glycoprotein	Family
A, D [auth F], H [auth K], O [auth S]	IPR000930	Peptidase S3, togavirin	Domain
A, D [auth F], H [auth K], O [auth S]	IPR002548	Alphavirus E1 glycoprotein	Domain
A, D [auth F], H [auth K], O [auth S]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
A, D [auth F], H [auth K], O [auth S]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR002533	Alphavirus E3 spike glycoprotein	Domain
B, C, E [auth G], K [auth O]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR042304	Alphavirus E2 glycoprotein, domain A	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR042305	Alphavirus E2 glycoprotein, domain B	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR042306	Alphavirus E2 glycoprotein, domain C	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR000936	Alphavirus E2 glycoprotein	Family
B, C, E [auth G], K [auth O]	IPR000930	Peptidase S3, togavirin	Domain
B, C, E [auth G], K [auth O]	IPR002548	Alphavirus E1 glycoprotein	Domain
B, C, E [auth G], K [auth O]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
B, C, E [auth G], K [auth O]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR002533	Alphavirus E3 spike glycoprotein	Domain
F [auth I], I [auth L], L [auth P], P [auth T]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR042304	Alphavirus E2 glycoprotein, domain A	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR042305	Alphavirus E2 glycoprotein, domain B	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR042306	Alphavirus E2 glycoprotein, domain C	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR000936	Alphavirus E2 glycoprotein	Family
F [auth I], I [auth L], L [auth P], P [auth T]	IPR000930	Peptidase S3, togavirin	Domain
F [auth I], I [auth L], L [auth P], P [auth T]	IPR002548	Alphavirus E1 glycoprotein	Domain
F [auth I], I [auth L], L [auth P], P [auth T]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
F [auth I], I [auth L], L [auth P], P [auth T]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR002533	Alphavirus E3 spike glycoprotein	Domain
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR042304	Alphavirus E2 glycoprotein, domain A	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR042305	Alphavirus E2 glycoprotein, domain B	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR042306	Alphavirus E2 glycoprotein, domain C	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR000936	Alphavirus E2 glycoprotein	Family
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR000930	Peptidase S3, togavirin	Domain
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR002548	Alphavirus E1 glycoprotein	Domain
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
G [auth J], J [auth N], M [auth Q], N [auth R]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D [auth F], E [auth G] A, B, C, D [auth F], E [auth G], F [auth I], G [auth J], H [auth K], I [auth L], J [auth N], K [auth O], L [auth P], M [auth Q], N [auth R], O [auth S], P [auth T]	OPM	Transmembrane	Bitopic proteins	Viral membrane fusion glycoprotein	Alphavirus E1 glycoprotein