7QAP | pdb_00007qap

Three-dimensional structure of the PGAM5 G17L mutant TMD

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Serine/threonine-protein phosphatase PGAM5, mitochondrial	phosphoric ester hydrolase activity phosphoprotein phosphatase activity protein serine/threonine phosphatase activity catalytic activity, acting on a protein hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity catalytic activity	necroptotic process programmed necrotic cell death cellular process cell death programmed cell death catabolic process macroautophagy autophagy metabolic process process utilizing autophagic mechanism multicellular organismal process regulation of biological process regulation of cellular process negative regulation of cold-induced thermogenesis necroptotic process programmed necrotic cell death cellular process cell death programmed cell death catabolic process macroautophagy autophagy metabolic process process utilizing autophagic mechanism multicellular organismal process regulation of biological process regulation of cellular process negative regulation of cold-induced thermogenesis homeostatic process negative regulation of metabolic process biological regulation negative regulation of biological process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis negative regulation of cellular process temperature homeostasis regulation of multicellular organismal process negative regulation of multicellular organismal process regulation of metabolic process positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of developmental process positive regulation of biological process cellular component organization positive regulation of developmental process anatomical structure development cellular component organization or biogenesis positive regulation of cellular process regulation of anatomical structure morphogenesis mitochondrion organization developmental process organelle fission mitochondrial fission regulation of organelle organization anatomical structure morphogenesis organelle organization regulation of mitochondrial fission regulation of mitochondrion organization positive regulation of mitochondrial fission	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane organelle outer membrane bounding membrane of organelle mitochondrial outer membrane outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013078	Histidine phosphatase superfamily, clade-1	Family
A	IPR029033	Histidine phosphatase superfamily	Homologous Superfamily
A	IPR051021	Mitochondrial serine/threonine phosphatase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q96HS1	central nervous system cancer

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Peptides	Alpha-helical peptides	Peptides of transmembrane proteins	Protease inhibitory peptides

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Intramembrane Proteases	PGAM5 WT transmembrane domain (TMD)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.