Annotations: 7Y3F

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth J]	SCOP2B Superfamily	Subunit IX of photosystem I reaction centre, PsaJ	8094669	3000824	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Subunit III of photosystem I reaction centre, PsaF	8094713	3000813	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Electron transport accessory proteins	8093812	3000325	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Photosystem I subunit PsaD	8094737	3000951	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	4Fe-4S ferredoxins	8093786	3000020	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Photosystem I subunits PsaA/PsaB	8094389	3000850	SCOP2B (2022-06-29)
J [auth M]	SCOP2B Superfamily	Subunit XII of photosystem I reaction centre, PsaM	8094801	3000829	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Photosystem I subunits PsaA/PsaB	8094435	3000850	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L [auth 1]	PsaL	e7y3f12	A: alpha bundles	X: Photosystem I reaction center subunit XI, PsaL (From Topology)	H: Photosystem I reaction center subunit XI, PsaL (From Topology)	T: Photosystem I reaction center subunit XI, PsaL	F: PsaL	ECOD (1.6)
L [auth 1]	PSII_1st	e7y3f11	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PSII_1st	ECOD (1.6)
H [auth J]	PSI_PsaJ	e7y3fJ1	A: extended segments	X: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)	H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)	T: Subunit IX of photosystem I reaction centre, PsaJ	F: PSI_PsaJ	ECOD (1.6)
G [auth I]	PSI_8	e7y3fI1	A: extended segments	X: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)	H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)	T: Subunit VIII of photosystem I reaction centre, PsaI	F: PSI_8	ECOD (1.6)
F	PSI_PsaF	e7y3fF1	A: extended segments	X: Subunit III of photosystem I reaction centre, PsaF (From Topology)	H: Subunit III of photosystem I reaction centre, PsaF (From Topology)	T: Subunit III of photosystem I reaction centre, PsaF	F: PSI_PsaF	ECOD (1.6)
E	PSI_PsaE	e7y3fE1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: PSI_PsaE	ECOD (1.6)
D	PsaD	e7y3fD1	A: a+b two layers	X: Photosystem I subunit PsaD (From Topology)	H: Photosystem I subunit PsaD (From Topology)	T: Photosystem I subunit PsaD	F: PsaD	ECOD (1.6)
C	Fer4_21_1	e7y3fC1	A: a+b two layers	X: 4Fe-4S ferredoxin (From Topology)	H: 4Fe-4S ferredoxin (From Topology)	T: 4Fe-4S ferredoxin	F: Fer4_21_1	ECOD (1.6)
B	PsaA_PsaB_C	e7y3fB1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PsaA_PsaB_C	ECOD (1.6)
B	PsaA_PsaB_N	e7y3fB2	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PsaA_PsaB_N	ECOD (1.6)
P [auth 5]	PSII_1st	e7y3f51	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PSII_1st	ECOD (1.6)
O [auth 4]	PSII_1st	e7y3f41	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PSII_1st	ECOD (1.6)
K [auth X]	PsaX	e7y3fX1	A: extended segments	X: Subunit PsaX of photosystem I reaction centre (From Topology)	H: Subunit PsaX of photosystem I reaction centre (From Topology)	T: Subunit PsaX of photosystem I reaction centre	F: PsaX	ECOD (1.6)
J [auth M]	PsaM	e7y3fM1	A: extended segments	X: Subunit XII of photosystem I reaction centre, PsaM (From Topology)	H: Subunit XII of photosystem I reaction centre, PsaM (From Topology)	T: Subunit XII of photosystem I reaction centre, PsaM	F: PsaM	ECOD (1.6)
A	PsaA_PsaB_C	e7y3fA2	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PsaA_PsaB_C	ECOD (1.6)
A	PsaA_PsaB_N	e7y3fA1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PsaA_PsaB_N	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
L [auth 1]	PF02605	Photosystem I reaction centre subunit XI (PsaL)	Photosystem I reaction centre subunit XI	-	Family
L [auth 1]	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
H [auth J]	PF01701	Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)	Photosystem I reaction centre subunit IX / PsaJ	-	Family
G [auth I]	PF00796	Photosystem I reaction centre subunit VIII (PSI_8)	Photosystem I reaction centre subunit VIII	-	Family
F	PF02507	Photosystem I reaction centre subunit III (PSI_PsaF)	Photosystem I reaction centre subunit III	-	Family
E	PF02427	Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)	Photosystem I reaction centre subunit IV / PsaE	PsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1].	Domain
D	PF02531	PsaD (PsaD)	PsaD	-	Family
C	PF12838	4Fe-4S dicluster domain (Fer4_7)	4Fe-4S dicluster domain	Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...	Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.	Domain
B	PF00223	Photosystem I psaA/psaB protein (PsaA_PsaB)	Photosystem I psaA/psaB protein	-	Family
O [auth 4], P [auth 5]	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
J [auth M]	PF07465	Photosystem I protein M (PsaM) (PsaM)	Photosystem I protein M (PsaM)	-	Family
A	PF00223	Photosystem I psaA/psaB protein (PsaA_PsaB)	Photosystem I psaA/psaB protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
L [auth 1]	Photosystem I reaction center subunit XI	-	-	-
I [auth K]	Unknown	-	-	-
H [auth J]	Photosystem I reaction center subunit IX	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
G [auth I]	Photosystem I reaction center subunit VIII	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
F	Photosystem I reaction center subunit III	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex photosystem I reaction center
E	Photosystem I reaction center subunit IV	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex photosystem I reaction center
D	Photosystem I reaction center subunit II	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex photosystem I reaction center
C	Photosystem I iron-sulfur center	oxidoreductase activity catalytic activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding electron transfer activity cation binding ion binding metal ion binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy photosynthetic electron transport in photosystem I	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
B	Photosystem I P700 chlorophyll a apoprotein A2 1	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding chlorophyll binding tetrapyrrole binding electron transfer activity	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
O [auth 4], P [auth 5]	Iron stress-induced chlorophyll-binding protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
M [auth 2], N [auth 3], Q [auth 6]	IsiA	-	-	-
K [auth X]	Photosystem I 4.8 kDa protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
J [auth M]	PsaM	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex
A	Photosystem I P700 chlorophyll a apoprotein A1	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding chlorophyll binding tetrapyrrole binding electron transfer activity	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex photosystem photosystem I membrane protein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H [auth J]	IPR002615	Photosystem I PsaJ, reaction centre subunit IX	Family
H [auth J]	IPR036062	Photosystem I PsaJ, reaction centre subunit IX superfamily	Homologous Superfamily
G [auth I]	IPR036357	Photosystem I reaction centre subunit VIII superfamily	Homologous Superfamily
G [auth I]	IPR001302	Photosystem I reaction centre subunit VIII	Family
F	IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	Homologous Superfamily
F	IPR003666	Photosystem I PsaF, reaction centre subunit III	Family
E	IPR008990	Electron transport accessory-like domain superfamily	Homologous Superfamily
E	IPR003375	Photosystem I PsaE, reaction centre subunit IV	Family
D	IPR003685	Photosystem I PsaD	Family
D	IPR036579	Photosystem I, reaction centre subunit PsaD superfamily	Homologous Superfamily
C	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
C	IPR050157	Photosystem I iron-sulfur center	Family
C	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
C	IPR017491	Photosystem I protein PsaC	Family
B	IPR036408	Photosystem I PsaA/PsaB superfamily	Homologous Superfamily
B	IPR001280	Photosystem I PsaA/PsaB	Family
B	IPR006244	Photosystem I PsaB	Family
B	IPR020586	Photosystem I PsaA/PsaB, conserved site	Conserved Site
O [auth 4], P [auth 5]	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
O [auth 4], P [auth 5]	IPR000932	Photosystem antenna protein-like	Family
K [auth X]	IPR036243	Photosystem I PsaX superfamily	Homologous Superfamily
K [auth X]	IPR012986	Photosystem I PsaX	Family
J [auth M]	IPR010010	Photosystem I PsaM, reaction centre	Family
J [auth M]	IPR037279	Photosystem I PsaM, reaction centre superfamily	Homologous Superfamily
A	IPR006243	Photosystem I PsaA	Family
A	IPR036408	Photosystem I PsaA/PsaB superfamily	Homologous Superfamily
A	IPR001280	Photosystem I PsaA/PsaB	Family
A	IPR020586	Photosystem I PsaA/PsaB, conserved site	Conserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G [auth I], H [auth J], J [auth M], K [auth X], O [auth 4], P [auth 5]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G [auth I], H [auth J], J [auth M], K [auth X], O [auth 4], P [auth 5]	MemProtMD	Annotated as membrane protein by MemProtMD