Annotations: 8QX8

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F [auth C]	PF05131	Pep3/Vps18/deep orange beta-propeller domain (Pep3_Vps18)	Pep3/Vps18/deep orange beta-propeller domain	-	Repeat
D [auth A]	PF12451	Vacuolar protein sorting protein 11 C terminal (VPS11_C)	Vacuolar protein sorting protein 11 C terminal	-	Family
C [auth B]	PF04840	Vps16, C-terminal region (Vps16_C)	Vps16, C-terminal region	-	Repeat
C [auth B]	PF04841	Vps16, N-terminal region (Vps16_N)	Vps16, N-terminal region	-	Repeat
B [auth D]	PF00995	Sec1 family (Sec1)	Sec1 family	-	Family
A [auth F]	PF12816	Vps8 central TPR (TPR_Vps8)	Vps8 central TPR	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F [auth C]	Vacuolar membrane protein PEP3	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein-macromolecule adaptor activity molecular adaptor activity	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport late endosome to vacuole transport cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport late endosome to vacuole transport vacuolar transport vesicle-mediated transport regulation of biological process regulation of cellular component organization regulation of cellular process vacuole organization biological regulation regulation of vacuole organization regulation of organelle organization cellular component organization organelle fusion organelle organization vacuole fusion vacuole fusion, non-autophagic regulation of vacuole fusion, non-autophagic cellular component organization or biogenesis vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting organelle localization vesicle tethering secretion export from cell membrane docking organelle localization by membrane tethering secretion by cell exocytosis vesicle docking exocytic process vesicle docking involved in exocytosis membrane fusion organelle membrane fusion cellular component biogenesis vesicle organization regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly SNARE complex assembly membrane organization protein-containing complex organization regulation of cellular component biogenesis regulation of SNARE complex assembly vesicle fusion Golgi to endosome transport post-Golgi vesicle-mediated transport cytosolic transport Golgi vesicle transport endosome organization endomembrane system organization	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane protein-containing complex CORVET complex endosome intracellular vesicle endomembrane system vesicle tethering complex cytoplasmic vesicle vesicle membrane protein complex HOPS complex endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane vesicle membrane cytosol
E	Vacuolar protein sorting-associated protein 3	-	cellular component organization organelle organization vacuole organization organelle inheritance vacuole inheritance cellular process cellular component organization or biogenesis regulation of biological process regulation of cellular component organization regulation of cellular process biological regulation regulation of vacuole organization regulation of organelle organization organelle fusion cellular component organization organelle organization vacuole organization organelle inheritance vacuole inheritance cellular process cellular component organization or biogenesis regulation of biological process regulation of cellular component organization regulation of cellular process biological regulation regulation of vacuole organization regulation of organelle organization organelle fusion vacuole fusion vacuole fusion, non-autophagic regulation of vacuole fusion, non-autophagic establishment of protein localization cellular localization nitrogen compound transport transport protein targeting establishment of protein localization to vacuole intracellular transport protein localization to vacuole establishment of localization localization establishment of protein localization to organelle protein transport establishment of localization in cell protein localization to organelle macromolecule localization vacuolar transport intracellular protein localization protein targeting to vacuole intracellular protein transport vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting vesicle-mediated transport organelle localization vesicle tethering catabolic process autophagy metabolic process process utilizing autophagic mechanism membrane organization endosomal vesicle fusion membrane fusion organelle membrane fusion vesicle organization vesicle fusion homeostatic process intracellular pH reduction regulation of intracellular pH vacuolar acidification cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane protein-containing complex CORVET complex endosome intracellular vesicle endomembrane system vesicle tethering complex cytoplasmic vesicle vesicle endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane vesicle membrane
D [auth A]	E3 ubiquitin-protein ligase PEP5	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding zinc ion binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	localization cellular localization late endosome to vacuole transport transport establishment of localization in cell cellular process vacuolar transport intracellular transport establishment of localization vesicle-mediated transport secretion export from cell membrane docking organelle localization by membrane tethering localization cellular localization late endosome to vacuole transport transport establishment of localization in cell cellular process vacuolar transport intracellular transport establishment of localization vesicle-mediated transport secretion export from cell membrane docking organelle localization by membrane tethering secretion by cell exocytosis organelle localization vesicle docking exocytic process vesicle docking involved in exocytosis organelle fusion cellular component organization organelle organization cellular component organization or biogenesis vacuole fusion vacuole organization vacuole fusion, non-autophagic regulation of cellular process regulation of cellular component organization membrane fusion organelle membrane fusion cellular component biogenesis vesicle organization regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly SNARE complex assembly membrane organization regulation of biological process protein-containing complex organization biological regulation regulation of cellular component biogenesis regulation of SNARE complex assembly vesicle fusion establishment of protein localization nitrogen compound transport protein transport macromolecule localization intracellular protein localization intracellular protein transport regulation of vacuole organization regulation of organelle organization regulation of vacuole fusion, non-autophagic vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting vesicle tethering catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process histone catabolic process macromolecule catabolic process Golgi to endosome transport post-Golgi vesicle-mediated transport cytosolic transport Golgi vesicle transport endosome organization endomembrane system organization	membrane-bounded organelle protein-containing complex intracellular anatomical structure CORVET complex endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system vesicle tethering complex intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm membrane-bounded organelle protein-containing complex intracellular anatomical structure CORVET complex endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system vesicle tethering complex intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle cytosol vacuolar membrane storage vacuole membrane lytic vacuole vacuole fungal-type vacuole lytic vacuole membrane bounding membrane of organelle organelle membrane fungal-type vacuole membrane membrane protein complex HOPS complex endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane vesicle membrane
C [auth B]	Vacuolar protein sorting-associated protein 16	cytoskeletal protein binding actin binding protein binding binding	localization cellular localization late endosome to vacuole transport transport establishment of localization in cell cellular process vacuolar transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport regulation of biological process regulation of cellular component organization regulation of cellular process localization cellular localization late endosome to vacuole transport transport establishment of localization in cell cellular process vacuolar transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport regulation of biological process regulation of cellular component organization regulation of cellular process vacuole organization biological regulation regulation of vacuole organization regulation of organelle organization cellular component organization organelle fusion organelle organization vacuole fusion vacuole fusion, non-autophagic regulation of vacuole fusion, non-autophagic cellular component organization or biogenesis establishment of protein localization nitrogen compound transport protein targeting establishment of protein localization to vacuole protein localization to vacuole establishment of protein localization to organelle protein transport protein localization to organelle macromolecule localization intracellular protein localization protein targeting to vacuole intracellular protein transport vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting organelle localization vesicle tethering membrane fusion organelle membrane fusion cellular component biogenesis vesicle organization regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly SNARE complex assembly membrane organization protein-containing complex organization regulation of cellular component biogenesis regulation of SNARE complex assembly vesicle fusion Golgi to endosome transport post-Golgi vesicle-mediated transport cytosolic transport Golgi vesicle transport	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane protein-containing complex CORVET complex endosome intracellular vesicle endomembrane system vesicle tethering complex cytoplasmic vesicle vesicle membrane protein complex HOPS complex endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane vesicle membrane cytosol
B [auth D]	Vacuolar protein sorting-associated protein 33	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	cellular localization post-Golgi vesicle-mediated transport transport intracellular transport establishment of localization vesicle-mediated transport Golgi to vacuole transport localization establishment of localization in cell vacuolar transport cellular process Golgi vesicle transport import into cell endocytosis cellular localization post-Golgi vesicle-mediated transport transport intracellular transport establishment of localization vesicle-mediated transport Golgi to vacuole transport localization establishment of localization in cell vacuolar transport cellular process Golgi vesicle transport import into cell endocytosis catabolic process macroautophagy autophagy piecemeal microautophagy of the nucleus metabolic process microautophagy nucleophagy process utilizing autophagic mechanism organelle fusion cellular component organization vacuole fusion organelle organization vacuole organization vacuole fusion, non-autophagic cellular component organization or biogenesis regulation of cellular process regulation of cellular component organization membrane fusion organelle membrane fusion cellular component biogenesis vesicle organization regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly SNARE complex assembly membrane organization regulation of biological process protein-containing complex organization biological regulation regulation of cellular component biogenesis regulation of SNARE complex assembly vesicle fusion establishment of protein localization nitrogen compound transport protein transport macromolecule localization intracellular protein localization intracellular protein transport regulation of vacuole organization regulation of organelle organization regulation of vacuole fusion, non-autophagic protein targeting establishment of protein localization to vacuole protein localization to vacuole establishment of protein localization to organelle protein localization to organelle protein targeting to vacuole vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting organelle localization vesicle tethering organelle localization by membrane tethering vesicle docking membrane docking vesicle fusion with vacuole	membrane-bounded organelle storage vacuole intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle cellular anatomical structure organelle cytoplasm protein-containing complex CORVET complex endosome membrane-bounded organelle storage vacuole intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle cellular anatomical structure organelle cytoplasm protein-containing complex CORVET complex endosome intracellular vesicle endomembrane system vesicle tethering complex cytoplasmic vesicle vesicle cytosol vacuolar membrane membrane lytic vacuole membrane bounding membrane of organelle organelle membrane fungal-type vacuole membrane membrane protein complex HOPS complex endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane vesicle membrane
A [auth F]	Vacuolar protein sorting-associated protein 8	protein-membrane adaptor activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein binding enzyme binding GTPase binding	cellular localization transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport localization late endosome to vacuole transport late endosome to vacuole transport via multivesicular body sorting pathway multivesicular body sorting pathway establishment of localization in cell cellular process vacuolar transport endosome transport via multivesicular body sorting pathway cellular localization transport intracellular transport establishment of localization vesicle-mediated transport endosomal transport localization late endosome to vacuole transport late endosome to vacuole transport via multivesicular body sorting pathway multivesicular body sorting pathway establishment of localization in cell cellular process vacuolar transport endosome transport via multivesicular body sorting pathway regulation of biological process regulation of cellular component organization regulation of cellular process vacuole organization biological regulation regulation of vacuole organization regulation of organelle organization cellular component organization organelle fusion organelle organization vacuole fusion vacuole fusion, non-autophagic regulation of vacuole fusion, non-autophagic cellular component organization or biogenesis establishment of protein localization nitrogen compound transport protein targeting establishment of protein localization to vacuole protein localization to vacuole establishment of protein localization to organelle protein transport protein localization to organelle macromolecule localization intracellular protein localization protein targeting to vacuole intracellular protein transport vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting organelle localization vesicle tethering membrane organization endosomal vesicle fusion membrane fusion organelle membrane fusion vesicle organization vesicle fusion	membrane-bounded organelle intracellular anatomical structure Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure organelle Golgi stack cytoplasm protein-containing complex CORVET complex membrane-bounded organelle intracellular anatomical structure Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure organelle Golgi stack cytoplasm protein-containing complex CORVET complex endosome intracellular vesicle vesicle tethering complex cytoplasmic vesicle vesicle membrane membrane protein complex HOPS complex endosome membrane early endosome early endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane late endosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F [auth C]	IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	Repeat
F [auth C]	IPR007810	Pep3/Vps18/deep orange, beta-propeller domain	Domain
E	IPR001180	Citron homology (CNH) domain	Domain
E	IPR032914	Vam6/VPS39/TRAP1 family	Family
D [auth A]	IPR001965	Zinc finger, PHD-type	Domain
D [auth A]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
D [auth A]	IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	Repeat
D [auth A]	IPR024763	Vacuolar protein sorting protein 11, C-terminal	Domain
D [auth A]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
D [auth A]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
D [auth A]	IPR016528	Vacuolar protein sorting-associated protein 11	Family
D [auth A]	IPR001841	Zinc finger, RING-type	Domain
C [auth B]	IPR016534	Vacuolar protein sorting-associated protein 16	Family
C [auth B]	IPR006925	Vps16, C-terminal	Domain
C [auth B]	IPR038132	Vps16, C-terminal domain superfamily	Homologous Superfamily
C [auth B]	IPR006926	Vps16, N-terminal	Domain
B [auth D]	IPR036045	Sec1-like superfamily	Homologous Superfamily
B [auth D]	IPR027482	Sec1-like, domain 2	Homologous Superfamily
B [auth D]	IPR043155	Vacuolar protein sorting-associated protein 33, domain 3b	Homologous Superfamily
B [auth D]	IPR043127	Sec1-like, domain 3a	Homologous Superfamily
B [auth D]	IPR001619	Sec1-like protein	Family
A [auth F]	IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	Repeat
A [auth F]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A [auth F]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth F]	IPR045111	Vacuolar protein sorting-associated protein Vps41/Vps8	Family
A [auth F]	IPR001841	Zinc finger, RING-type	Domain
A [auth F]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A [auth F]	IPR025941	Vacuolar protein sorting-associated protein 8, central domain	Domain