8S9U | pdb_00008s9u

CRISPR-Cas type III-D effector complex bound to a target RNA

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
PF22335Cas10/Cmr2, second palm domain (Cas10-Cmr2_palm2)Cas10/Cmr2, second palm domainThis entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5]. ...This entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5].
Domain
PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cas7-Cas5-Cas11- -
TIGR03984 family CRISPR-associated protein- - -
Cas10- -
Cas7-2x- -
TIGR03986 family CRISPR-associated RAMP protein- -
CRISPR RNA---
Target RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR052216CRISPR-associated Csm3 endoribonucleaseFamily
IPR005537CRISPR type III-associated proteinDomain
IPR023815CRISPR-associated protein Csx19Family
IPR054767Cas10/Cmr2, second palm domainDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR052216CRISPR-associated Csm3 endoribonucleaseFamily
IPR005537CRISPR type III-associated proteinDomain
IPR023825CRISPR-associated RAMP BGP1436Family
IPR005537CRISPR type III-associated proteinDomain