8SGD | pdb_00008sgd

Crystal Structure of CDC3(G) - CDC10(Delta 1-10) heterocomplex from Saccharomyces cerevisiae

External Resource: Annotation

Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
C	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
D	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF00735	Septin (Septin)	Septin	Members of this family include CDC3, CDC10, CDC11 and CDC12/Septin. Members of this family bind GTP. As regards the septins, these are polypeptides of 30-65kDa with three characteristic GTPase motifs (G-1, G-3 and G-4) that are similar to those of t ...	Members of this family include CDC3, CDC10, CDC11 and CDC12/Septin. Members of this family bind GTP. As regards the septins, these are polypeptides of 30-65kDa with three characteristic GTPase motifs (G-1, G-3 and G-4) that are similar to those of the Ras family. The G-4 motif is strictly conserved with a unique septin consensus of AKAD. Most septins are thought to have at least one coiled-coil region, which in some cases is necessary for intermolecular interactions that allow septins to polymerise to form rod-shaped complexes. In turn, these are arranged into tandem arrays to form filaments. They are multifunctional proteins, with roles in cytokinesis, sporulation, germ cell development, exocytosis and apoptosis [2].	Domain
B, D	PF00735	Septin (Septin)	Septin	Members of this family include CDC3, CDC10, CDC11 and CDC12/Septin. Members of this family bind GTP. As regards the septins, these are polypeptides of 30-65kDa with three characteristic GTPase motifs (G-1, G-3 and G-4) that are similar to those of t ...	Members of this family include CDC3, CDC10, CDC11 and CDC12/Septin. Members of this family bind GTP. As regards the septins, these are polypeptides of 30-65kDa with three characteristic GTPase motifs (G-1, G-3 and G-4) that are similar to those of the Ras family. The G-4 motif is strictly conserved with a unique septin consensus of AKAD. Most septins are thought to have at least one coiled-coil region, which in some cases is necessary for intermolecular interactions that allow septins to polymerise to form rod-shaped complexes. In turn, these are arranged into tandem arrays to form filaments. They are multifunctional proteins, with roles in cytokinesis, sporulation, germ cell development, exocytosis and apoptosis [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	CDC10 isoform 1	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding 1-phosphatidylinositol binding phospholipid binding lipid binding phosphatidylinositol binding phosphatidylinositol phosphate binding phosphatidylinositol-4-phosphate binding phosphatidylinositol-5-phosphate binding structural constituent of cytoskeleton structural molecule activity molecular adaptor activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cytoskeleton-dependent cytokinesis cellular process cytokinesis cell division cell cycle cell cycle process mitotic cell cycle process mitotic cytokinesis mitotic cell cycle localization macromolecule localization intracellular protein localization developmental process sporulation cytoskeleton-dependent cytokinesis cellular process cytokinesis cell division cell cycle cell cycle process mitotic cell cycle process mitotic cytokinesis mitotic cell cycle localization macromolecule localization intracellular protein localization developmental process sporulation mitotic nuclear division organelle fission cell cycle phase transition exit from mitosis cellular component organization nuclear division organelle organization cellular component organization or biogenesis mitotic cell cycle phase transition septin ring organization organelle assembly protein-containing complex organization membraneless organelle assembly septin ring assembly cellular component biogenesis cellular component assembly septin cytoskeleton organization protein-containing complex assembly cytoskeleton organization septum digestion after cytokinesis cytokinesis, division site positioning cellular bud neck septin ring organization cytokinetic process	cellular anatomical structure ascospore-type prospore intracellular immature spore intracellular anatomical structure cell cortex septin ring intracellular membraneless organelle intracellular organelle cell periphery cytoskeleton organelle membraneless organelle septin cytoskeleton cytoplasm cellular anatomical structure ascospore-type prospore intracellular immature spore intracellular anatomical structure cell cortex septin ring intracellular membraneless organelle intracellular organelle cell periphery cytoskeleton organelle membraneless organelle septin cytoskeleton cytoplasm septin filament array cell projection mating projection cell tip mating projection tip cell pole plasma membrane bounded cell projection site of polarized growth cell division site protein-containing complex septin complex fungal-type cell wall external encapsulating structure ascospore wall cell wall spore wall cellular bud neck cellular bud cleavage apparatus septin structure transferase complex protein kinase complex catalytic complex transferase complex, transferring phosphorus-containing groups Gin4 complex cellular bud neck septin structure cellular bud neck septin ring serine/threonine protein kinase complex microtubule cytoskeleton membrane prospore membrane mating projection base polymeric cytoskeletal fiber spindle spindle microtubule supramolecular fiber microtubule supramolecular polymer supramolecular complex meiotic spindle
B, D	CDC3 isoform 1	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol-4-phosphate binding phosphatidylinositol binding phosphatidylinositol-5-phosphate binding structural constituent of cytoskeleton structural molecule activity molecular adaptor activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cytoskeleton-dependent cytokinesis cellular process cytokinesis cell division cell cycle cell cycle process mitotic cell cycle process mitotic cytokinesis mitotic cell cycle localization macromolecule localization intracellular protein localization cellular component organization cellular component disassembly cytoskeleton-dependent cytokinesis cellular process cytokinesis cell division cell cycle cell cycle process mitotic cell cycle process mitotic cytokinesis mitotic cell cycle localization macromolecule localization intracellular protein localization cellular component organization cellular component disassembly organelle organization septin ring organization septin ring disassembly organelle disassembly septin cytoskeleton organization cellular component organization or biogenesis cytoskeleton organization organelle assembly protein-containing complex organization membraneless organelle assembly septin ring assembly cellular component biogenesis cellular component assembly protein-containing complex assembly septum digestion after cytokinesis cytokinesis, division site positioning cellular bud neck septin ring organization cytokinetic process	intracellular anatomical structure cell cortex septin ring intracellular membraneless organelle intracellular organelle cell periphery cellular anatomical structure cytoskeleton organelle membraneless organelle septin cytoskeleton cytoplasm septin filament array cell division site intracellular anatomical structure cell cortex septin ring intracellular membraneless organelle intracellular organelle cell periphery cellular anatomical structure cytoskeleton organelle membraneless organelle septin cytoskeleton cytoplasm septin filament array cell division site protein-containing complex septin complex fungal-type cell wall external encapsulating structure ascospore wall cell wall spore wall cellular bud neck cellular bud cleavage apparatus septin structure transferase complex protein kinase complex catalytic complex transferase complex, transferring phosphorus-containing groups Gin4 complex cellular bud neck septin structure cellular bud neck septin ring serine/threonine protein kinase complex site of polarized growth microtubule cytoskeleton ascospore-type prospore membrane prospore membrane intracellular immature spore cell projection mating projection base mating projection plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR030379	Septin-type guanine nucleotide-binding (G) domain	Domain
A, C	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, C	IPR016491	Septin	Family
B, D	IPR030379	Septin-type guanine nucleotide-binding (G) domain	Domain
B, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B, D	IPR016491	Septin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.