8TPM | pdb_00008tpm

nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the absence of Ca2+

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth B]	SCOP2B Superfamily	Anoctamin-like	8092889	3002639	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Anoctamin-like	8092889	3002639	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF20877	Alpha-beta plait domain in TMEM16 lipid scramblase (Anoctamin_N)	Alpha-beta plait domain in TMEM16 lipid scramblase	This entry represents an alpha-beta plait domain from a group of fungal TMEM16 family of proteins, also known as anoctamins, including SwissProt:Q4WA18 from Aspergillus fumigatus and ist2 from S.pombe. Proteins in this entry operate as Ca2+-activated ...	This entry represents an alpha-beta plait domain from a group of fungal TMEM16 family of proteins, also known as anoctamins, including SwissProt:Q4WA18 from Aspergillus fumigatus and ist2 from S.pombe. Proteins in this entry operate as Ca2+-activated lipid scramblases [1-3]. This domain may play a role in dimerisation, although its precise function is uncertain.	Domain
A [auth B], B [auth A]	PF04547	Calcium-activated chloride channel (Anoctamin)	Calcium-activated chloride channel	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A]	Lipid scramblase nhTMEM16	monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity monoatomic ion channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity channel activity monoatomic anion channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity inorganic anion transmembrane transporter activity chloride channel activity cation binding ion binding monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity monoatomic ion channel activity passive transmembrane transporter activity inorganic molecular entity transmembrane transporter activity channel activity monoatomic anion channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity inorganic anion transmembrane transporter activity chloride channel activity cation binding ion binding binding metal ion binding small molecule binding identical protein binding protein binding	-	cellular anatomical structure membrane membrane-bounded organelle cell cortex intracellular anatomical structure cortical endoplasmic reticulum organelle subcompartment intracellular membrane-bounded organelle endomembrane system cell periphery endoplasmic reticulum subcompartment intracellular organelle organelle endoplasmic reticulum cellular anatomical structure membrane membrane-bounded organelle cell cortex intracellular anatomical structure cortical endoplasmic reticulum organelle subcompartment intracellular membrane-bounded organelle endomembrane system cell periphery endoplasmic reticulum subcompartment intracellular organelle organelle endoplasmic reticulum cytoplasm endoplasmic reticulum tubular network

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A]	IPR007632	Anoctamin	Family
A [auth B], B [auth A]	IPR049452	Anoctamin, transmembrane domain	Domain
A [auth B], B [auth A]	IPR049456	Anoctamin, alpha-beta plait domain, fungal-type	Domain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth B], B [auth A]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth B], B [auth A]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	TMEM16 Family Proteins	TMEM16 Ca²⁺-activated lipid scramblase, in MSP1E3 lipid nanodisc

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.