70S initiation complex (tRNA-fMet M1 + CUG start codon)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth D] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8083400 | 3001473 | SCOP2B (2022-06-29) |
| G [auth B] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8097404 | 3001397 | SCOP2B (2022-06-29) |
| YA [auth w] | SCOP2B Superfamily | L28p-like | 8106038 | 3001966 | SCOP2B (2022-06-29) |
| WA [auth u] | SCOP2B Superfamily | Ribosomal protein L25-like | 8042538 | 3001161 | SCOP2B (2022-06-29) |
| TA [auth r] | SCOP2B Superfamily | Ribosomal protein L22 | 8096336 | 3001078 | SCOP2B (2022-06-29) |
| D [auth 3] | SCOP2B Superfamily | Ribosomal protein L36 | 8093434 | 3001346 | SCOP2B (2022-06-29) |
| MA [auth k] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8096018 | 3001045 | SCOP2B (2022-06-29) |
| LA [auth j] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8106350 | 3000433 | SCOP2B (2022-06-29) |
| EA [auth c] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8035393 | 3000334 | SCOP2B (2022-06-29) |
| EA [auth c] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8035394 | 3000135 | SCOP2B (2022-06-29) |
| C [auth 2] | SCOP2B Superfamily | L35p-like | 8035388 | 3000790 | SCOP2B (2022-06-29) |
| Z [auth U] | SCOP2B Superfamily | Ribosomal protein S21 | 8093436 | 3002159 | SCOP2B (2022-06-29) |
| X [auth S] | SCOP2B Superfamily | Ribosomal protein S19 | 8097382 | 3000686 | SCOP2B (2022-06-29) |
| V [auth Q] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8097384 | 3000135 | SCOP2B (2022-06-29) |
| U [auth P] | SCOP2B Superfamily | Ribosomal protein S16 | 8097402 | 3000680 | SCOP2B (2022-06-29) |
| T [auth O] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8097398 | 3001284 | SCOP2B (2022-06-29) |
| R [auth M] | SCOP2B Superfamily | S13-like H2TH domain | 8106110 | 3000053 | SCOP2B (2022-06-29) |
| P [auth K] | SCOP2B Superfamily | Translational machinery components | 8097392 | 3000571 | SCOP2B (2022-06-29) |
| O [auth J] | SCOP2B Superfamily | Ribosomal protein S10 | 8097380 | 3001336 | SCOP2B (2022-06-29) |
| N [auth I] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8097396 | 3000100 | SCOP2B (2022-06-29) |
| M [auth H] | SCOP2B Superfamily | Ribosomal protein S8 | 8097388 | 3000709 | SCOP2B (2022-06-29) |
| L [auth G] | SCOP2B Superfamily | Ribosomal protein S7 | 8077979 | 3000799 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | Ribosomal protein S6 | 8066495 | 3001323 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth D] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| I [auth D] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| I [auth D] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| H [auth C] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| H [auth C] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| H [auth C] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| H [auth C] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| G [auth B] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| E [auth 4] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| D [auth 3] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| C [auth 2] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| BA [auth Z] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| AA [auth X] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| Z [auth U] | PF01165 | Ribosomal protein S21 (Ribosomal_S21) | Ribosomal protein S21 | - | Family |
| Z [auth U] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
| Y [auth T] | PF01649 | Ribosomal protein S20 (Ribosomal_S20p) | Ribosomal protein S20 | - | Family |
| Y [auth T] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| Y [auth T] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| X [auth S] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| X [auth S] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| W [auth R] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| W [auth R] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| V [auth Q] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| V [auth Q] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| U [auth P] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| U [auth P] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| T [auth O] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| T [auth O] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| B [auth 1] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| S [auth N] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| R [auth M] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| R [auth M] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| Q [auth L] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| Q [auth L] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| P [auth K] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| P [auth K] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| O [auth J] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| O [auth J] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| N [auth I] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| N [auth I] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| M [auth H] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| M [auth H] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| L [auth G] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| K [auth F] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| J [auth E] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| J [auth E] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| J [auth E] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| A [auth 0] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| F [auth A] | 2MG | Parent Component: G |
| F [auth A] | 4OC | Parent Component: C |
| F [auth A] | 5MC | Parent Component: C |
| F [auth A] | G7M | Parent Component: G |
| F [auth A] | MA6 | Parent Component: A |
| F [auth A] | PSU | Parent Component: U |
| F [auth A] | UR3 | Parent Component: U |
| NA [auth l] | 4D4 | Parent Component: ARG |
| NA [auth l] | MS6 | |
| FA [auth d] | MEQ | Parent Component: GLN :  AA0071 :  N5-methyl-L-glutamine MOD:00080 |
| CA [auth a] | 1MG | Parent Component: G :  AA0071 |
| CA [auth a] | 2MA | Parent Component: A :  AA0071 |
| CA [auth a] | 2MG | Parent Component: G :  AA0071 |
| CA [auth a] | 3TD | Parent Component: U :  AA0071 |
| CA [auth a] | 5MC | Parent Component: C :  AA0071 |
| CA [auth a] | 5MU | Parent Component: U :  AA0071 |
| CA [auth a] | 6MZ | Parent Component: A :  AA0071 |
| CA [auth a] | G7M | Parent Component: G :  AA0071 |
| CA [auth a] | H2U | Parent Component: U :  AA0071 |
| CA [auth a] | OMC | Parent Component: C :  AA0071 |
| CA [auth a] | OMG | Parent Component: G :  AA0071 |
| CA [auth a] | OMU | Parent Component: U :  AA0071 |
| CA [auth a] | PSU | Parent Component: U :  AA0071 |
| Q [auth L] | D2T | Parent Component: ASP :  AA0071 |














