9B45 | pdb_00009b45

Pseudomonas phage Pa193 baseplate complex and tail fiber

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	PF22764	Tail fiber protein gp32 (E217_Gp32)	Tail fiber protein gp32	-	Family
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family
BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], GA [auth 1]	PF11041	Protein of unknown function (DUF2612) (DUF2612)	Protein of unknown function (DUF2612)	-	Family
AA [auth X], Y [auth V], Z [auth W]	PF22760	Baseplate component gp38 (Gp38_E217)	Baseplate component gp38	-	Family
AA [auth X], Y [auth V], Z [auth W]	PF11041	Protein of unknown function (DUF2612) (DUF2612)	Protein of unknown function (DUF2612)	-	Family
P [auth S], Q [auth T], R [auth U]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F]	PF22759	Baseplate hub gp41 (E217_GP41)	Baseplate hub gp41	-	Family
TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], YA [auth L]	PF18352	Phage protein Gp138 N-terminal domain (Gp138_N)	Phage protein Gp138 N-terminal domain	This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramole ...	This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120 [1].	Domain
TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], YA [auth L]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	gp37 Baseplate tube	-	-	-
BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], GA [auth 1]	gp46 Baseplate wedge 2	-	-	-
AA [auth X], Y [auth V], Z [auth W]	gp39 Ripcord-2	-	-	-
V [auth d], W [auth e], X [auth f]	gp42 Tail hub	-	-	-
S [auth a], T [auth b], U [auth c]	gp41 Tape measure protein	peptidoglycan lytic transglycosylase activity peptidoglycan muralytic activity lyase activity catalytic activity carbon-oxygen lyase activity, acting on polysaccharides carbon-oxygen lyase activity	glycosaminoglycan metabolic process aminoglycan metabolic process peptidoglycan metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process	cellular anatomical structure membrane
P [auth S], Q [auth T], R [auth U]	gp38 Ripcord-1	-	-	-
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F]	gp34 helical bundle	-	-	-
G [auth 2], H [auth 3], I [auth 4]	gp47 Tail fiber	-	-	-
AB [auth h], BB [auth i], ZA [auth g]	gp44 Tail tip	-	-	-
TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], YA [auth L]	gp35 Sheath initiator	-	-	-
A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], F [auth o], HA [auth q], IA [auth p], JA [auth r], KA [auth s], LA [auth t], MA [auth u]	gp45-a Baseplate wedge 1	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	IPR054440	Tail fiber protein gp32-like	Family
BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], GA [auth 1]	IPR021283	Protein of unknown function DUF2612	Family
AA [auth X], Y [auth V], Z [auth W]	IPR054442	E217 Baseplate component gp38-like	Family
V [auth d], W [auth e], X [auth f]	IPR054496	Baseplate hub gp41	Family
S [auth a], T [auth b], U [auth c]	IPR000189	Prokaryotic transglycosylase, active site	Active Site
S [auth a], T [auth b], U [auth c]	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily
S [auth a], T [auth b], U [auth c]	IPR008258	Transglycosylase SLT domain 1	Domain
P [auth S], Q [auth T], R [auth U]	IPR054442	E217 Baseplate component gp38-like	Family
AB [auth h], BB [auth i], ZA [auth g]	IPR037026	Vgr protein, OB-fold domain superfamily	Homologous Superfamily
AB [auth h], BB [auth i], ZA [auth g]	IPR041599	Phage protein Gp138 N-terminal domain	Domain
A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], F [auth o], HA [auth q], IA [auth p], JA [auth r], KA [auth s], LA [auth t], MA [auth u]	IPR006949	Baseplate protein J-like	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.