9MLA | pdb_00009mla

Pre-fusion HERV-K Envelope Protein Trimer Ectodomain in complex with Kenv-6 Fab

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
G, H, I
Heavy ChainIGHV9 -surface proteinSAbDab (2025-09-12)
J, K, L
Light ChainIGKV3 Kappasurface proteinSAbDab (2025-09-12)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF13804Retro-transcribing viruses envelope glycoprotein (HERV-K_env_2)Retro-transcribing viruses envelope glycoproteinThis family comes from human endogenous retrovirus K envelope glycoproteins. Domain
D, E, F
PF00517Retroviral envelope protein (GP41)Retroviral envelope protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Surface protein -
D, E, F
Transmembrane protein,Fibritin -
G, H, I
Kenv-6 Fab heavy chain---
J, K, L
Kenv-6 Fab light chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029104Retro-transcribing virus envelope glycoproteinDomain
A, B, C
IPR000328Retroviral envelope protein GP41-likeDomain
A, B, C
IPR051255Retroviral envelope glycoproteinFamily
D, E, F
IPR012473Fibritin C-terminalDomain
D, E, F
IPR029104Retro-transcribing virus envelope glycoproteinDomain
D, E, F
IPR000328Retroviral envelope protein GP41-likeDomain
D, E, F
IPR051255Retroviral envelope glycoproteinFamily