SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAGU AS PART OF HAIRPIN R(GCGUUAAGUCGCA)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1 mM RNA oligomer - H2O; 3 mM RNA oligomer - D2O | 0.1 M NaCl, 0.01 M sodium phosphate | 7.0 | 1.0 atm | 303 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| restrained molecular dynamics & energy minimization | Discover | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | average structure of 30 conformers |
| Conformers Calculated Total Number | 30 |
| Conformers Submitted Total Number | 1 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | Discover | version 2.98 | MSI |
| 2 | refinement | Discover | version 2.98 | MSI |
