X-RAY DIFFRACTION
Crystallization
| Crystalization Experiments | ||||
|---|---|---|---|---|
| ID | Method | pH | Temperature | Details | 
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.4 | 298 | PEG 8000, Ammonium Acetate, Sodium Acetate, Sodium cacodylate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K | 
| Crystal Properties | |
|---|---|
| Matthews coefficient | Solvent content | 
| 2.65 | 53.66 | 
Crystal Data
| Unit Cell | |
|---|---|
| Length ( Å ) | Angle ( ˚ ) | 
| a = 68.358 | α = 90 | 
| b = 74.213 | β = 90 | 
| c = 196.604 | γ = 90 | 
| Symmetry | |
|---|---|
| Space Group | P 21 21 21 | 
Diffraction
| Diffraction Experiment | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
| 1 | 1 | x-ray | 100 | CCD | ADSC QUANTUM 4 | 1999-12-02 | M | SINGLE WAVELENGTH | ||||||
| Radiation Source | |||||
|---|---|---|---|---|---|
| ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline | 
| 1 | SYNCHROTRON | SSRL BEAMLINE BL9-2 | 1.00 | SSRL | BL9-2 | 
Data Collection
| Overall | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | R Sym I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | |||||||
| 1 | 2.8 | 20 | 98.6 | 0.08 | 0.099 | 18.9 | 1 | 25005 | 25005 | 1 | 1 | 25.5 | |||||||
| Highest Resolution Shell | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | R Merge I (Observed) | R-Sym I (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) | ||||||||||
| 1 | 2.8 | 2.9 | 89.6 | 0.3 | 0.284 | 3 | 1 | 2234 | |||||||||||
Refinement
| Statistics | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Diffraction ID | Structure Solution Method | Cross Validation method | Starting model | Resolution (High) | Resolution (Low) | Number Reflections (All) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (Observed) | R-Work (Depositor) | R-Work (DCC) | R-Free (Depositor) | R-Free (DCC) | R-Free Selection Details | Mean Isotropic B | |||
| X-RAY DIFFRACTION | MOLECULAR REPLACEMENT | THROUGHOUT | pdb entry 3fru, pdb entry 1fc1 | 2.8 | 19.95 | 25005 | 25005 | 1195 | 98.6 | 0.222 | 0.222 | 0.23 | 0.292 | 0.3 | RANDOM | 78.2 | |||
| Temperature Factor Modeling | ||||||
|---|---|---|---|---|---|---|
| Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] | |
| 24.29 | -6.04 | -18.26 | ||||
| RMS Deviations | |
|---|---|
| Key | Refinement Restraint Deviation | 
| c_dihedral_angle_d | 25.6 | 
| c_scangle_it | 20.74 | 
| c_mcangle_it | 17.52 | 
| c_scbond_it | 14.6 | 
| c_mcbond_it | 11.22 | 
| c_angle_deg | 1.6 | 
| c_improper_angle_d | 1.15 | 
| c_bond_d | 0.009 | 
| Non-Hydrogen Atoms Used in Refinement | |
|---|---|
| Non-Hydrogen Atoms | Number | 
| Protein Atoms | 6182 | 
| Nucleic Acid Atoms | |
| Solvent Atoms | 6 | 
| Heterogen Atoms | 338 | 
Software
| Software | |
|---|---|
| Software Name | Purpose | 
| DENZO | data reduction | 
| SCALEPACK | data scaling | 
| AMoRE | phasing | 
| CNS | refinement | 














