RotateHydrogensLabels

1RN

(E)-N-{[4-oxo-1-(5-O-phosphono-beta-D-arabinofuranosyl)-2-thioxo-1,2,3,4-tetrahydropyrimidin-5-yl]methylidene}glycine

Find entries where:
1RN is present as a standalone ligand
1RN as a non-polymer is covalently linked to polymer or other heterogen groups
1RN is present in a polymer sequence


View summary at Ligand Expo



Chemical Component Summary

Name(E)-N-{[4-oxo-1-(5-O-phosphono-beta-D-arabinofuranosyl)-2-thioxo-1,2,3,4-tetrahydropyrimidin-5-yl]methylidene}glycine
Identifiers2-[(E)-[1-[(2R,3S,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-4-oxidanylidene-2-sulfanylidene-pyrimidin-5-yl]methylideneamino]ethanoic acid
FormulaC12 H16 N3 O10 P S
Molecular Weight425.31
TypeRNA LINKING
Isomeric SMILESO[C@H]1[C@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C(C=NCC(O)=O)C(=O)NC2=S
InChIInChI=1S/C12H16N3O10PS/c16-7(17)2-13-1-5-3-15(12(27)14-10(5)20)11-9(19)8(18)6(25-11)4-24-26(21,22)23/h1,3,6,8-9,11,18-19H,2,4H2,(H,16,17)(H,14,20,27)(H2,21,22,23)/b13-1+/t6-,8-,9+,11-/m1/s1
InChIKeyOIOFJGQNCGWJPT-PDCDXKGCSA-N

Chemical Details

Formal Charge0
Atom Count43
Chiral Atom Count4
Bond Count44
Aromatic Bond Count0