4U3

5-chloro-2'-deoxycytidine 5'-(dihydrogen phosphate)

Created:	2015-05-27
Last modified:	2020-06-05

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3 entries where 4U3 is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	34
Chiral Atom Count	3
Bond Count	35
Aromatic Bond Count	0

2D diagram of 4U3

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Chemical Component Summary
Name	5-chloro-2'-deoxycytidine 5'-(dihydrogen phosphate)
Synonyms	5-Chloro-5'-deoxycytidine
Systematic Name (OpenEye OEToolkits)	[(2R,3S,5R)-5-(4-azanyl-5-chloranyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₉ H₁₃ Cl N₃ O₇ P
Molecular Weight	341.642
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	C1(N=C(N)C(Cl)=CN1C2OC(COP(=O)(O)O)C(O)C2)=O
SMILES	CACTVS	3.385	NC1=NC(=O)N(C=C1Cl)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2
SMILES	OpenEye OEToolkits	1.9.2	C1C(C(OC1N2C=C(C(=NC2=O)N)Cl)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.385	NC1=NC(=O)N(C=C1Cl)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2
Canonical SMILES	OpenEye OEToolkits	1.9.2	C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)Cl)COP(=O)(O)O)O
InChI	InChI	1.03	InChI=1S/C9H13ClN3O7P/c10-4-2-13(9(15)12-8(4)11)7-1-5(14)6(20-7)3-19-21(16,17)18/h2,5-7,14H,1,3H2,(H2,11,12,15)(H2,16,17,18)/t5-,6+,7+/m0/s1
InChIKey	InChI	1.03	JXVVNBLPBHXIAA-RRKCRQDMSA-N

Related Resource References

Resource Name	Reference
PubChem	18637363

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