5PC

5(1-PROPYNYL)-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE

Created:	2003-03-11
Last modified:	2011-06-04

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3 entries where 5PC is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	39
Chiral Atom Count	3
Bond Count	40
Aromatic Bond Count	0

2D diagram of 5PC

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Chemical Component Summary
Name	5(1-PROPYNYL)-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
Systematic Name (OpenEye OEToolkits)	[(2R,3S,5R)-5-(4-amino-2-oxo-5-prop-1-ynyl-pyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₂ H₁₆ N₃ O₇ P
Molecular Weight	345.245
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1N=C(N)C(C#CC)=CN1C2OC(C(O)C2)COP(=O)(O)O
SMILES	CACTVS	3.341	CC#CC1=CN([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)N=C1N
SMILES	OpenEye OEToolkits	1.5.0	CC#CC1=CN(C(=O)N=C1N)C2CC(C(O2)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.341	CC#CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)N=C1N
Canonical SMILES	OpenEye OEToolkits	1.5.0	CC#CC1=CN(C(=O)N=C1N)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
InChI	InChI	1.03	InChI=1S/C12H16N3O7P/c1-2-3-7-5-15(12(17)14-11(7)13)10-4-8(16)9(22-10)6-21-23(18,19)20/h5,8-10,16H,4,6H2,1H3,(H2,13,14,17)(H2,18,19,20)/t8-,9+,10+/m0/s1
InChIKey	InChI	1.03	JMXAJBGSEDAXSC-IVZWLZJFSA-N

Related Resource References

Resource Name	Reference
PubChem	49866536

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