5SE

2'-deoxy-5-(methylselanyl)cytidine 5'-(dihydrogen phosphate)

Created:	2009-08-07
Last modified:	2011-06-04

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1 entries where 5SE is found in a polymer sequence

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Chemical Details
Formal Charge	0
Atom Count	38
Chiral Atom Count	3
Bond Count	39
Aromatic Bond Count	0

2D diagram of 5SE

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Chemical Component Summary
Name	2'-deoxy-5-(methylselanyl)cytidine 5'-(dihydrogen phosphate)
Systematic Name (OpenEye OEToolkits)	[(2R,3S,5R)-5-(4-azanyl-5-methylselanyl-2-oxo-pyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₀ H₁₆ N₃ O₇ P Se
Molecular Weight	400.184
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	11.02	O=P(O)(O)OCC2OC(N1C(=O)N=C(N)C([Se]C)=C1)CC2O
SMILES	CACTVS	3.352	C[Se]C1=CN([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)N=C1N
SMILES	OpenEye OEToolkits	1.7.0	C[Se]C1=CN(C(=O)N=C1N)C2CC(C(O2)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.352	C[Se]C1=CN([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)N=C1N
Canonical SMILES	OpenEye OEToolkits	1.7.0	C[Se]C1=CN(C(=O)N=C1N)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
InChI	InChI	1.03	InChI=1S/C10H16N3O7PSe/c1-22-7-3-13(10(15)12-9(7)11)8-2-5(14)6(20-8)4-19-21(16,17)18/h3,5-6,8,14H,2,4H2,1H3,(H2,11,12,15)(H2,16,17,18)/t5-,6+,8+/m0/s1
InChIKey	InChI	1.03	NLUQHLNACKOXLS-SHYZEUOFSA-N

Related Resource References

Resource Name	Reference
PubChem	49866540

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