GDP

GUANOSINE-5'-DIPHOSPHATE

GDP is found in 893 entries.

GDP in polymers: 25 entries. Examples include 1D4R 1E8O 1RY1

GDP as free ligands, exist in 868 entries. Examples include 1A2K 1A4R 1AA9

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo



Chemical Component Summary

Name GUANOSINE-5'-DIPHOSPHATE
Identifiers [(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate
Formula C10 H15 N5 O11 P2
Molecular Weight 443.201  g/mol
Type RNA LINKING
Isomeric SMILES Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](CO[P@@](O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O
InChI InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey QGWNDRXFNXRZMB-UUOKFMHZSA-N

Chemical Details

Formal Charge 0
Atom Count 43
Chiral Atom Count 4
Chiral Atoms C1' C2' C3' C4'
Bond Count 45
Aromatic Bond Count 5
Leaving Atoms n/a

Drug Info: DrugBank

DrugBank ID DB04315   (Different stereochemistry)
Name Guanosine-5'-Diphosphate
Groups experimental
Description A guanine nucleotide containing two phosphate groups esterified to the sugar moiety. [PubChem]
CAS number 146-91-8

Drug Targets

Name Sequence Search Pharmacological Action Actions
GTPase Der MATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKT... unknown
Eukaryotic translation initiation factor 2 subunit 3 MAGGEAGVTLGQPHLSRQDLTTLDVTKLTPLSHEVISRQATINIGTIGHV... unknown
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEM... unknown
Elongation factor G MAVKVEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAA... unknown
Guanine nucleotide-binding protein G(i) subunit alpha-1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIV... unknown
View More Drug Targets
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID: 21059682