Rotate Hydrogens Labels

T39

2'-O-METHOXYETHYLENE THYMIDINE 5'-MONOPHOSPHATE

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T39 is present as a standalone ligand

T39 as a non-polymer is covalently linked to polymer or other heterogen groups

T39 is present in a polymer sequence

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View summary at Ligand Expo

Chemical Component Summary
Name	2'-O-METHOXYETHYLENE THYMIDINE 5'-MONOPHOSPHATE
Identifiers	[(2R,3R,4R,5R)-4-(2-methoxyethoxy)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₃ H₂₁ N₂ O₁₀ P
Molecular Weight	396.29
Type	RNA LINKING
Isomeric SMILES	COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1N2C=C(C)C(=O)NC2=O
InChI	InChI=1S/C13H21N2O10P/c1-7-5-15(13(18)14-11(7)17)12-10(23-4-3-22-2)9(16)8(25-12)6-24-26(19,20)21/h5,8-10,12,16H,3-4,6H2,1-2H3,(H,14,17,18)(H2,19,20,21)/t8-,9-,10-,12-/m1/s1
InChIKey	BLSQXXFKLSKRRX-DNRKLUKYSA-N

Chemical Details
Formal Charge	0
Atom Count	47
Chiral Atom Count	4
Bond Count	48
Aromatic Bond Count	0

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.