UDP

URIDINE-5'-DIPHOSPHATE

UDP is found in 352 entries.

UDP in polymers: 1 entry. Example includes 2AIZ

UDP as free ligands, exist in 351 entries. Examples include 2PZM 2J65 2ACV

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo



Chemical Component Summary

Name URIDINE-5'-DIPHOSPHATE
Identifiers [(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate
Formula C9 H14 N2 O12 P2
Molecular Weight 404.161  g/mol
Type RNA LINKING
Isomeric SMILES O[C@@H]1[C@@H](CO[P@](O)(=O)OP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O
InChI InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey XCCTYIAWTASOJW-XVFCMESISA-N

Chemical Details

Formal Charge 0
Atom Count 39
Chiral Atom Count 4
Chiral Atoms C1' C2' C3' C4'
Bond Count 40
Aromatic Bond Count 0
Leaving Atoms n/a

Drug Info: DrugBank

DrugBank ID DB03435   (Different stereochemistry)
Name Uridine-5'-Diphosphate
Groups experimental
Description A uracil nucleotide containing a pyrophosphate group esterified to C5 of the sugar moiety. [PubChem]
CAS number 58-98-0

Drug Targets

Name Sequence Search Pharmacological Action Actions
Exostosin-like 2 MRCCHICKLPGRVMGIRVLRLSLVVILVLLLVAGALTALLPSVKEDKMLM... unknown
UMP-CMP kinase MKPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYG... unknown
UDP-glucose 4-epimerase MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK... unknown
UDP-N-acetylglucosamine 2-epimerase MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF... unknown
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNED... unknown
View More Drug Targets
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID: 21059682