Rotate Hydrogens Labels

XPB

O6-[4-oxo-4-(3-pyridyl)butyl]-2'-deoxyguanosine-5'-monophosphate

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XPB is present as a standalone ligand

XPB as a non-polymer is covalently linked to polymer or other heterogen groups

XPB is present in a polymer sequence

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View summary at Ligand Expo

Chemical Component Summary
Name	O6-[4-oxo-4-(3-pyridyl)butyl]-2'-deoxyguanosine-5'-monophosphate
Identifiers	[(2R,3S,5R)-5-[2-azanyl-6-(4-oxidanylidene-4-pyridin-3-yl-butoxy)purin-9-yl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₉ H₂₃ N₆ O₈ P
Molecular Weight	494.39
Type	DNA LINKING
Isomeric SMILES	Nc1nc(OCCCC(=O)c2cccnc2)c3ncn([C@H]4C[C@H](O)[C@@H](CO[P](O)(O)=O)O4)c3n1
InChI	InChI=1S/C19H23N6O8P/c20-19-23-17-16(18(24-19)31-6-2-4-12(26)11-3-1-5-21-8-11)22-10-25(17)15-7-13(27)14(33-15)9-32-34(28,29)30/h1,3,5,8,10,13-15,27H,2,4,6-7,9H2,(H2,20,23,24)(H2,28,29,30)/t13-,14+,15+/m0/s1
InChIKey	YYZAHCOFAHEYAN-RRFJBIMHSA-N

Chemical Details
Formal Charge	0
Atom Count	57
Chiral Atom Count	3
Bond Count	60
Aromatic Bond Count	16

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.