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240,665
Structures from the PDB archive

1,068,577
Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy ID (Full Lineage) = "10366"

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Search Summary

This query matches 23 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	Murid betaherpesvirus 1 (10)
	Muromegalovirus G4 (7)
	Murine cytomegalovirus (strain Smith) (5)
	Rattus norvegicus (5)
	Murine cytomegalovirus (strain K181) (1)
	Mus musculus (1)

Taxonomy

	Duplodnaviria (23)
	Eukaryota (6)

Experimental Method

	ELECTRON MICROSCOPY (11)
	X-RAY DIFFRACTION (10)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (23)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (4)
	2.5 - 3.0 (2)
	3.0 - 3.5 (4)
	4.0 - 4.5 (1)
	> 4.5 (7)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (5)
	2010 - 2014 (4)
	2015 - 2019 (7)
	2020 - 2024 (6)

Membrane Protein Annotation

	mpstruc (4)
	MemProtMD (3)
	OPM (3)
	PDBTM (3)

Symmetry Type

	Asymmetric (11)
	Cyclic (7)
	Icosahedral (5)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	All beta proteins (2)

AllSelected

1 to 23 of 23 Polymer Entities

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1PQZ: Entity 1	Download File View File

MURINE CYTOMEGALOVIRUS IMMUNOMODULATORY PROTEIN M144

Miley, M.J., Fremont, D.H., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2004-07-06
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	MCMV M144

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1U58: Entity 1	Download File View File

Crystal structure of the murine cytomegalovirus MHC-I homolog m144

Natarajan, K., Hicks, A., Robinson, H., Guan, R., Margulies, D.H.

(2006) J Mol Biology 358: 157-171

Released	2005-07-19
Method	X-RAY DIFFRACTION 1.9 Å
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	MHC-I homolog m144

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2J7Q: Entity 1	Download File View File

Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument protein M48 in complex with a ubquitin-based suicide substrate

Schlieker, C., Weihofen, W.A., Frijns, E., Kattenhorn, L.M., Gaudet, R., Ploegh, H.L.

(2007) Mol Cell 25: 677

Released	2007-03-20
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, M48USP

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2J7Q: Entity 3	Download File View File

Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument protein M48 in complex with a ubquitin-based suicide substrate

Schlieker, C., Weihofen, W.A., Frijns, E., Kattenhorn, L.M., Gaudet, R., Ploegh, H.L.

(2007) Mol Cell 25: 677

Released	2007-03-20
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	C
Organism	Murid betaherpesvirus 1
Macromolecule	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, M48USP

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2MIZ: Entity 1	Download File View File

Structure of the m04/gp34 mouse Cytomegalovirus Immunoevasin core domain

Sgourakis, N.G., Natarajan, K., Margulies, D.H., Bax, A.

(2014) Structure 22: 1263-1273

Released	2014-07-16
Method	SOLUTION NMR
Chain ID	A
Organism	Murine cytomegalovirus (strain K181)
Macromolecule	m04 immunoevasin

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2NYK: Entity 1	Download File View File

Crystal structure of m157 from mouse cytomegalovirus

Garcia, K.C.

(2007) Proc Natl Acad Sci U S A 104: 10128-10133

Released	2007-05-29
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	M157

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2O5N: Entity 1	Download File View File

Crystal structure of a Viral Glycoprotein

Mans, J., Natarajan, K., Robinson, H., Margulies, D.H.

(2007) J Biological Chem 282: 35247-35258

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.4 Å
Chain IDs	A, B
Organism	Murid betaherpesvirus 1
Macromolecule	MuHV1gpm153

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4G59: Entity 2	Download File View File

Crystal structure of the murine cytomegalovirus MHC-I homolog m152 with ligand RAE-1 gamma

Wang, R., Natarajan, K., Margulies, D.H.

(2012) Proc Natl Acad Sci U S A 109: E3578-E3587

Released	2012-12-19
Method	X-RAY DIFFRACTION 2.44 Å
Chain IDs	B [auth C], D
Organism	Murid betaherpesvirus 1
Macromolecule	M152 protein

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4JO8: Entity 1	Download File View File

Crystal structure of the activating Ly49H receptor in complex with m157 (G1F strain)

Berry, R., Ng, N., Saunders, P.M., Vivian, J.P., Lin, J., Deuss, F.A., Corbett, A.J., Forbes, C.A., Widjaja, J.M., Sullivan, L.C., McAlister, A.D., Perugini, M.A., Call, M.J., Scalzo, A.A., Degli-Esposti, M.A., Coudert, J.D., Beddoe, T., Brooks, A.G., Rossjohn, J.

(2013) Nat Immunol 14: 699-705

Released	2013-05-22
Method	X-RAY DIFFRACTION 3.2 Å
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	M157

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4PN6: Entity 1	Download File View File

Structure of the Cytomegalovirus-Encoded m04 Glycoprotein

Berry, R., Rossjohn, J.

(2014) J Biological Chem 289: 23753-23763

Released	2014-07-23
Method	X-RAY DIFFRACTION 3 Å
Chain IDs	A, B
Organism	Muromegalovirus G4
Macromolecule	M04

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5A3G: Entity 1	Download File View File

Structure of herpesvirus nuclear egress complex subunit M50

Leigh, K.E., Boeszoermenyi, A., Mansueto, M.S., Sharma, M., Filman, D.J., Coen, D.M., Wagner, G., Hogle, J.M., Arthanari, H.

(2015) Proc Natl Acad Sci U S A 112: 9010

Released	2015-07-15
Method	SOLUTION NMR
Chain ID	A
Organism	Murid betaherpesvirus 1
Macromolecule	M50

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5TZN: Entity 2	Download File View File

Structure of the viral immunoevasin m12 (Smith) bound to the natural killer cell receptor NKR-P1B (B6)

Berry, R., Rossjohn, J.

(2017) Cell 169: 58-71.e14

Released	2017-05-24
Method	X-RAY DIFFRACTION 2.6 Å
Chain IDs	B [auth F], C [auth G]
Organism	Murid betaherpesvirus 1
Macromolecule	Glycoprotein family protein m12

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6NHJ: Entity 1	Download File View File

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

Liu, W., Dai, X.H., Jih, J., Chan, K., Trang, P., Yu, X.K., Balogun, R., Mei, Y., Liu, F.Y., Zhou, Z.H.

(2019) PLoS Pathog 15: e1007615-e1007615

Released	2019-03-06
Method	ELECTRON MICROSCOPY 5 Å
Chain IDs	A, D, H, K [auth l], L [auth m] More (16)
Organism	Murine cytomegalovirus (strain Smith)
Macromolecule	Major capsid protein

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6NHJ: Entity 2	Download File View File

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

Liu, W., Dai, X.H., Jih, J., Chan, K., Trang, P., Yu, X.K., Balogun, R., Mei, Y., Liu, F.Y., Zhou, Z.H.

(2019) PLoS Pathog 15: e1007615-e1007615

Released	2019-03-06
Method	ELECTRON MICROSCOPY 5 Å
Chain IDs	R [auth 3], S [auth e], U [auth f], V [auth i], X [auth j]
Organism	Murine cytomegalovirus (strain Smith)
Macromolecule	Tegument protein

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6NHJ: Entity 3	Download File View File

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

Liu, W., Dai, X.H., Jih, J., Chan, K., Trang, P., Yu, X.K., Balogun, R., Mei, Y., Liu, F.Y., Zhou, Z.H.

(2019) PLoS Pathog 15: e1007615-e1007615

Released	2019-03-06
Method	ELECTRON MICROSCOPY 5 Å
Chain IDs	AA [auth L], CA [auth N], DA [auth O], EA [auth P], FA [auth Q] More (16)
Organism	Murine cytomegalovirus (strain Smith)
Macromolecule	Small capsomere-interacting protein

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6NHJ: Entity 4	Download File View File

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

Liu, W., Dai, X.H., Jih, J., Chan, K., Trang, P., Yu, X.K., Balogun, R., Mei, Y., Liu, F.Y., Zhou, Z.H.

(2019) PLoS Pathog 15: e1007615-e1007615

Released	2019-03-06
Method	ELECTRON MICROSCOPY 5 Å
Chain IDs	PA [auth S], QA [auth T], RA [auth U], SA [auth V], OA [auth y]
Organism	Murine cytomegalovirus (strain Smith)
Macromolecule	Minor capsid protein

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6NHJ: Entity 5	Download File View File

Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development

Liu, W., Dai, X.H., Jih, J., Chan, K., Trang, P., Yu, X.K., Balogun, R., Mei, Y., Liu, F.Y., Zhou, Z.H.

(2019) PLoS Pathog 15: e1007615-e1007615

Released	2019-03-06
Method	ELECTRON MICROSCOPY 5 Å
Chain IDs	BB [auth c], CB [auth d], TA [auth z], XA [auth Z], AB [auth b] More (10)
Organism	Murine cytomegalovirus (strain Smith)
Macromolecule	Triplex capsid protein 2

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7RFP: Entity 1	Download File View File

Mouse GITR (mGITR) with DTA-1 Fab fragment

Meyerson, J.R., He, C.

(2022) Sci Adv 8: eabm4552-eabm4552

Released	2022-03-09
Method	ELECTRON MICROSCOPY 4.4 Å
Chain IDs	A, B
Organism	Muromegalovirus G4 Mus musculus
Macromolecule	Tumor necrosis factor receptor superfamily member 18,Enhanced green fluorescent protein

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7ZJD: Entity 1	Download File View File

Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein

Zhang, L., Gourdon, P., Zygmunt, P.M.

(2022) Nat Commun 13: 7483-7483

Released	2023-01-18
Method	ELECTRON MICROSCOPY 2.94 Å
Chain IDs	A, B [auth C], C [auth B], D
Organism	Muromegalovirus G4 Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein

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7ZJE: Entity 1	Download File View File

C16-2

Zhang, L., Gourdon, P., Zygmunt, P.M.

(2022) Nat Commun 13: 7483-7483

Released	2023-01-18
Method	ELECTRON MICROSCOPY 3.12 Å
Chain IDs	A, B, C, D
Organism	Muromegalovirus G4 Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein

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7ZJI: Entity 1	Download File View File

Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein

Zhang, L., Gourdon, P., Zygmunt, P.M.

(2022) Nat Commun 13: 7483-7483

Released	2023-01-18
Method	ELECTRON MICROSCOPY 3.4 Å
Chain IDs	A [auth B], B [auth A], C, D
Organism	Muromegalovirus G4 Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein

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8JF7: Entity 2	Download File View File

Triheteromeric NMDA receptor GluN1-GluN2A-GluN3A in complex with glycine, glutamate, a GluN1-specific Fab,and a GluN2A-specific Fab

Kou, Z., Zhu, S.

To be published

Released	2024-05-22
Method	ELECTRON MICROSCOPY 7.73 Å
Chain ID	B
Organism	Muromegalovirus G4 Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, NMDA 2A,Enhanced green fluorescent protein

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8JF7: Entity 3	Download File View File

Triheteromeric NMDA receptor GluN1-GluN2A-GluN3A in complex with glycine, glutamate, a GluN1-specific Fab,and a GluN2A-specific Fab

Kou, Z., Zhu, S.

To be published

Released	2024-05-22
Method	ELECTRON MICROSCOPY 7.73 Å
Chain ID	D
Organism	Muromegalovirus G4 Rattus norvegicus
Macromolecule	Glutamate receptor ionotropic, NMDA 3A,Enhanced green fluorescent protein