PDB Statistics: PDB Data Distribution by Expression System Organism

Expression organism for these structures is from a genetically manipulated source.

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Expression System OrganismNumber of Entries
Escherichia coli87,462
Escherichia coli BL21(DE3)45,880
Escherichia coli BL218,220
Spodoptera frugiperda7,340
Homo sapiens7,314
Trichoplusia ni2,392
Escherichia coli 'BL21-Gold(DE3)pLysS AG1,863
Komagataella pastoris1,769
Escherichia coli K-121,292
Cricetulus griseus1,272
Saccharomyces cerevisiae1,227
Drosophila melanogaster644
Mus musculus466
unidentified baculovirus345
Bacillus subtilis242
synthetic construct242
Escherichia coli DH5[alpha]216
Aspergillus oryzae206
Komagataella phaffii GS115197
Escherichia coli B176
Insect cell expression vector pTIE1156
Saccharomyces cerevisiae S288C146
Escherichia coli-Pichia pastoris shuttle vector pPpARG4142
Baculovirus expression vector pFastBac1-HM136
Escherichia coli M15115
Gallus gallus113
Mycolicibacterium smegmatis110
Cereibacter sphaeroides108
Spodoptera aff. frugiperda 1 BOLD-2017101
unidentified97
Halobacterium salinarum73
Mycolicibacterium smegmatis MC2 15570
Enterobacteria phage L165
Drosophila64
Escherichia coli str. K-12 substr. W311060
Cricetinae57
Escherichia coli MC106157
Mesocricetus auratus56
Trichoderma reesei54
Aspergillus niger51
Escherichia coli str. K-12 substr. DH10B51
Escherichia phage EcSzw-251
Bos taurus49
Pichia49
Streptomyces lividans46
Komagataella phaffii CBS 743545
in vitro transcription vector pT7-TP(deltai)45
Nicotiana benthamiana44
Spodoptera aff. frugiperda 2 RZ-201443
Bacteria42
Dictyostelium discoideum42
Escherichia coli KRX40
Chlorocebus aethiops38
Lactococcus lactis38
Escherichia coli #1/H76637
Escherichia coli DH136
Mammalia36
Oryctolagus cuniculus34
Rattus norvegicus33
Streptomyces lividans TK2432
Cricetinae gen. sp.31
Salmonella enterica subsp. enterica serovar Typhimurium31
Spodoptera29
Escherichia28
Leishmania tarentolae28
Salmonella enterica28
Pseudomonas aeruginosa27
Rhodococcus erythropolis26
Thaumatococcus daniellii26
Thermus thermophilus26
in vitro transcription vector pT7-Fluc(deltai)25
Bacterial expression vector pBEN1-SGC24
Pseudomonas fluorescens24
Staphylococcus aureus24
Escherichia coli str. K-12 substr. MG165522
Thermus thermophilus HB822
Haloferax volcanii21
Escherichia coli HB10120
Parengyodontium album20
Sus scrofa20
Escherichia coli-Thermus thermophilus shuttle vector pTRH1T19
Pseudomonas putida19
Trichoderma reesei QM6a19
Bacillus thuringiensis serovar israelensis18
Desulfovibrio fructosivorans18
Insect BA phytoplasma18
Priestia megaterium18
Saccharomyces cerevisiae BY474118
Streptomyces rubiginosus18
Aedes albopictus17
Lactococcus lactis subsp. cremoris NZ900017
Vibrio cholerae17
Azotobacter vinelandii16
Desulfovibrio vulgaris str. Hildenborough16
Escherichia coli O103:H2 str. 1200916
Kluyveromyces lactis16
Bacillus anthracis15
Yarrowia lipolytica15
Paracoccus denitrificans14
Saccharomyces cerevisiae W30314
Trichoplusia14
Trypanosoma brucei brucei14
Arabidopsis thaliana13
Bacillus thermoproteolyticus13
Paracoccus denitrificans PD122213
Rhodobacter capsulatus13
mammal environmental sample13
Cereibacter sphaeroides 2.4.112
Insecta environmental sample12
Mammalian expression vector Flag-MCS-pcDNA3.112
Shewanella frigidimarina12
Shewanella oneidensis12
Geobacillus stearothermophilus11
Human gammaherpesvirus 411
Mammalian expression vector BsrGI-MCS-pcDNA3.111
Oryza sativa11
Schizosaccharomyces pombe11
Bacillus licheniformis10
Bacillus thuringiensis10
Brevibacillus choshinensis10
Escherichia coli BW2511310
Human immunodeficiency virus 110
Schizosaccharomyces10
Shewanella oneidensis MR-110
Bacillus amyloliquefaciens9
Baculoviridae sp.9
Brevibacillus9
Chlorocebus sabaeus9
Cupriavidus necator H169
Cyberlindnera jadinii9
Desulfovibrio vulgaris9
Sulfolobus islandicus REY15A9
Daucus carota8
Desulfovibrio fructosivorans JJ8
Influenza A virus8
Pichia kudriavzevii8
Pseudomonas aeruginosa PAO18
Rhodobacter capsulatus SB 10038
Rhodococcus jostii RHA18
hybrid8
Bacteroides thetaiotaomicron7
Escherichia coli 0427
Escherichia coli O157:H77
Escherichia coli-Pichia pastoris shuttle vector pPpGUT17
Escherichia virus T47
Expression vector pET-mod7
Komagataella phaffii7
Mus sp.7
Mycobacterium tuberculosis H37Rv7
Penicillium canescens7
Priestia megaterium NBRC 15308 = ATCC 145817
Thermoactinomyces vulgaris7
Trichoderma reesei RUT C-307
Trichopalpus nigribasis7
Vibrio natriegens7
Wolinella succinogenes7
unidentified plasmid7
Aedes albopictus C6/36 cell densovirus6
Agrobacterium tumefaciens6
Aspergillus awamori6
Aspergillus nidulans6
Baculovirus transfer vector pFASTBAC16
Chlamydomonas reinhardtii6
DNA satellites6
Desulfovibrio desulfuricans6
Enterococcus faecalis6
Escherichia phage T76
Mammalian expression vector EGFP-MCS-pcDNA3.16
Mammalian expression vector pBGSA6
Mus musculoides6
Pedobacter heparinus6
Streptomyces coelicolor6
Streptomyces sp.6
Synechocystis sp. PCC 68036
Thermothelomyces thermophilus ATCC 424646
Xanthomonas oryzae pv. oryzae6
Antheraea5
Aspergillus nidulans FGSC A45
Bacillus subtilis subsp. subtilis str. 1685
Baculoviridae5
Baculovirus expression vector pCTdual5
Bombyx mori5
Brevibacillus brevis5
Canavalia ensiformis5
Candida parapsilosis5
Escherichia phage Ecwhy_15
Geobacter metallireducens GS-155
Homo5
Mammalian expression vector pcDNA3.1-Flag5
Nicotiana tabacum5
Ogataea polymorpha RB115
Penicillium rubens Wisconsin 54-12555
Saccharomyces5
Streptomyces albus5
Toxoplasma gondii ME495
Trichoderma reesei QM94145
Aerococcus viridans4
Aeromonas salmonicida4
Aromatoleum evansii4
Bacteria Latreille et al. 18254
Burkholderia cepacia4
Canis lupus familiaris4
Clostridium pasteurianum4
Corynebacterium glutamicum ATCC 130324
Dictyostelium4
Escherichia coli 5364
Escherichia coli str. 'clone D i24
Escherichia coli-Pichia pastoris shuttle vector pPpB1GAP_S4
Lactococcus cremoris4
Lactococcus lactis subsp. lactis4
Lama glama4
Mammalian expression vector pCBio4
Moorella thermoacetica4
Mycolicibacterium vaccae4
Serratia marcescens4
Shewanella sp. ANA-34
Spodoptera frugiperda multiple nucleopolyhedrovirus4
Staphylococcaceae4
Streptomyces avidinii4
Sulfolobus islandicus4
Tetronarce californica4
Thermosynechococcus vestitus BP-14
Vaccinia virus4
Vaccinia virus Ankara4
Vaccinia virus GLV-1h684
Vibrio sp.4
Zymomonas mobilis4
Acheta domesticus3
Apis mellifera3
Atlantibacter hermannii3
Azotobacter vinelandii DJ3
Bacillus cereus3
Bacteria abnormis3
Bacterial expression vector pET-11a3
Brassica rapa subsp. chinensis3
Cell-free gateway cloning vector C-term 8xHis pCellFree_G023
Cell-free gateway cloning vector N-term 8xHis eGFP pCellFree_G033
Cercopithecus3
Chaetomium thermophilum3
Corynebacterium glutamicum3
Cupriavidus necator3
Cyanobacteria3
Enterococcus hirae3
Escherichia coli ATCC 87393
Escherichia coli str. 'clone D i143
Escherichia coli-Pichia pastoris shuttle vector pPpB1_S3
Escherichia coli-Pichia pastoris shuttle vector pPpHIS43
Felis catus3
Halobacterium3
Halobacterium salinarum R13
Hirudo medicinalis3
Human herpesvirus 4 strain B95-83
Influenza B virus3
Insect expression vector pBlueBacmsGCA1His3
Insect expression vector pBlueBacmsGCB13
Insecta3
Lactococcus lactis subsp. cremoris MG13633
Latilactobacillus sakei3
Lentivirus3
Mammalian 1 orthobornavirus3
Mammalian expression vector Flag-EGFP-MCS-pcDNA3.13
Mammalian expression vector HA-MCS-pcDNA3.13
Mammalian expression vector pcDNA3-N-HA-LIC3
Methylorubrum extorquens AM13
Ogataea angusta3
Ogataea methanolica3
Penicillium chrysogenum3
Phacoides pectinatus3
Phanerodontia chrysosporium3
Phaseolus vulgaris3
Physcomitrium patens3
Pisum sativum3
Porphyromonas gingivalis3
Pseudomonas sp.3
Pseudomonas stutzeri3
Pseudomonas syringae3
Pyrococcus furiosus COM13
Salmonella virus SP63
Schizosaccharomyces pombe 972h-3
Severe acute respiratory syndrome coronavirus 23
Shewanella3
Shewanella frigidimarina NCIMB 4003
Spodoptera frugiperda ascovirus 1a3
Sulfolobus acidocaldarius DSM 6393
Synthesium tursionis3
Tetrahymena thermophila3
Transcription vector pUC18-pES23
prokaryotic environmental samples3
synthetic Escherichia coli C321.deltaA3
Agrobacterium sp.2
Alcaligenes hydrogenophilus2
Alphabaculovirus2
Aspergillus aculeatinus2
Aspergillus sp.2
Autographa californica nucleopolyhedrovirus2
Blastochloris viridis2
Caldicellulosiruptor bescii2
Campylobacter jejuni2
Caulobacter vibrioides CB152
Cell-free gateway cloning vector N-term 8xHis pCellFree_G012
Chlorobaculum tepidum2
Chlorocebus aethiops aethiops2
Cloning vector pGEM3_Zf2
Cricetulus longicaudatus2
Cricetulus migratorius2
Ctenopharyngodon idella2
Cypovirus2
Drosophila acanthoptera2
Enterococcus faecium2
Equus caballus2
Escherichia alba2
Escherichia coli 15202
Escherichia coli C2
Escherichia coli CFT0732
Escherichia coli O103:H22
Escherichia coli O104:H4 str. 2009EL-20502
Escherichia coli str. K-12 substr. MC41002
Escherichia coli str. K-12 substr. MDS422
Escherichia coli-Pichia pastoris shuttle vector pPpB1GAP2
Escherichia coli-Pichia pastoris shuttle vector pPpT42
Escherichia phage HY012
Eukaryota sp.2
Gallus2
Gluconobacter sp.2
Helicobacter pylori 266952
Heliothis2
Herpesviridae sp.2
Histoplasma ohiense (nom. inval.)2
Homo sapiens neanderthalensis2
Insect expression vector pBlueBacmsGCA12
Klebsiella aerogenes2
Lactiplantibacillus plantarum2
Legionella pneumophila2
Listeria seeligeri2
Macaca mulatta polyomavirus 12
Mammalia sp. MMA-20192
Marinomonas mediterranea MMB-12
Methylococcus capsulatus2
Microlophus theresioides2
Milvago chimango chimango2
Mus2
Mycobacterium tuberculosis2
Mycolicibacterium smegmatis MC2 512
Nacobbus aberrans2
Nicotiana2
Novosphingobium subterraneum2
Oleidesulfovibrio alaskensis G202
Ovis aries2
Paenibacillus sp. SVP_R32
Paracoccus pantotrophus2
Peptide display vector fth12
Porphyromonas gingivalis W832
Pseudomonas alcaligenes2
Pseudomonas putida KT24402
Pseudomonas savastanoi pv. phaseolicola2
Pyrococcus furiosus2
Rhodobacter sp.2
Rhodopseudomonas palustris2
Saccharomyces cerevisiae BY47432
Salmonella enterica subsp. enterica serovar Typhimurium str. LT22
Schizosaccharomyces pombe expression vector pARG1B2
Shigella flexneri2
Staphylococcus aureus subsp. aureus NCTC 83252
Streptomyces coelicolor A3(2)2
Sus scrofa domesticus2
Talaromyces cellulolyticus2
Thermococcus kodakarensis2
Thermosynechococcus vestitus2
Tomato mosaic virus2
Trichoplusia ni ascovirus 2a2
Triticum aestivum2
Tritirachium2
Vibrio2
Vibrio cholerae O3952
Vigna unguiculata2
chemical production metagenome2
Achromobacter sp.1
Acidiphilium rubrum1
Acinetobacter baumannii1
Aeromonas schubertii1
Aeromonas sobria1
African cassava mosaic virus1
Alkalihalobacillus halodurans1
Alkalihalobacillus halodurans C-1251
Alkalihalobacillus pseudofirmus OF41
Aphyosemion etsamense1
Arabidopsis1
Aspergillus flavus1
Aspergillus luchuensis1
Aspergillus niger CBS 513.881
Aspergillus oryzae RIB401
Aspergillus pseudosclerotiorum1
Aspergillus terreus1
Autographa1
Azospira oryzae PS1
BAC cloning vector attB-P[acman]-ApR-F-2-5-attB1
Bacillus anthracis str. Ames1
Bacillus sp. H-2571
Bacillus thuringiensis BMB1711
Bacillus virus phi291
Bacterial expression vector pAIL21
Bacterial selection and production vector pMES41
Bacteroides thetaiotaomicron VPI-54821
Baculovirus expression vector pUltraBac-11
Beijerinckia1
Bluetongue virus 11
Bordetella pertussis1
Borreliella burgdorferi1
Branchiostoma lanceolatum1
Brevibacillus agri1
Camelus dromedarius1
Candida albicans SC53141
Canine parvovirus1
Carica papaya1
Caulobacter segnis1
Chaetomium thermophilum var. thermophilum DSM 14951
Cloning vector AbVec-hIgG11
Cloning vector AbVec-hIgKappa1
Cloning vector pNF22141
Cloning vector pUC191
Clostridioides difficile R202911
Clostridium tetanomorphum1
Cocos nucifera1
Comamonas sp. Hi51
Corynebacterium ammoniagenes1
Corynespora cassiicola1
Cricetus1
Cyanobium sp. PCC 70011
Cydia pomonella granulosis virus (isolate Mexican)1
Debaryomyces castellii1
Dendroaspis jamesoni jamesoni1
Dengue virus 4 Philippines/H241/19561
Desulfocurvibacter africanus1
Dictyostelium discoideum AX41
Diutina rugosa1
Drosophila albipalpis1
Drosophila falleni1
Drosophila hydei1
Drosophila melanocephala1
Drosophila nebulosa1
Drosophila sp. (in: Insecta)1
Ectothiorhodospira haloalkaliphila1
Enterobacteria phage fd1
Eosentomon sp. 1 EDA-20081
Erinaceus europaeus1
Escadabiidae1
Escharinidae1
Eschenbachia1
Escherichia coli 5-172-05_S1_C31
Escherichia coli 559891
Escherichia coli B411
Escherichia coli B831
Escherichia coli KO11FL1
Escherichia coli O127:H61
Escherichia coli O17 str. K12a1
Escherichia coli W1
Escherichia coli str. K-12 substr. MG1655star1
Escherichia coli-Pichia pastoris shuttle vector pPpB1_Alpha_S1
Escherichia coli-Pichia pastoris shuttle vector pPpKan_Alpha_S1
Escherichia coli-Thermus thermophilus shuttle vector pTRK1T1
Expression vector pET21a-LIC1
Francisella tularensis subsp. novicida1
Gadus morhua1
Galleria mellonella1
Gemmatimonas phototrophica1
Geobacillus thermodenitrificans1
Geobacter sulfurreducens1
Gloeobacter1
Gloeobacter violaceus PCC 74211
Gluconobacter oxydans1
Glycine max1
HIV whole-genome vector AA1305#181
Halobacterium salinarum NRC-11
Halobacterium sp.1
Halorubrum pleomorphic virus 21
Halorubrum pleomorphic virus 61
Halothiobacillus neapolitanus1
Hordeum vulgare1
Human adenovirus E41
Ignicoccus hospitalis1
Influenza A virus (A/duck/Fujian/13/2002(H5N1))1
Insect expression vector pBlueBacmsGCB1His1
Jasminum sambac1
Kitasatospora aureofaciens1
Klebsiella pneumoniae1
Kluyveromyces marxianus1
Komagataella pastoris DSMZ 703821
Kurthia sp. 11kri3211
Leishmania donovani1
Leptographium truncatum1
Leptoxyphium fumago1
Listeria monocytogenes EGD-e1
Mammalian expression vector pCI-NEO-FLAG-SMNdelta3,4,5,6,71
Mammalian expression vector pCK1461
Mammalian expression vector pCK91
Mammalian expression vector pCMV-Script1
Methanocaldococcus villosus1
Methanothermobacter thermautotrophicus1
Methanothermococcus thermolithotrophicus1
Methylococcus capsulatus str. Bath1
Methylophaga aminisulfidivorans1
Methylophaga aminisulfidivorans MP1
Methylorubrum extorquens PA11
Micromonospora sp. 47TW1
Moesziomyces antarcticus1
Moringa oleifera1
Murine norovirus 11
Mus abbotti1
Mycoplasma genitalium G371
Naja oxiana1
Natronomonas pharaonis1
Neisseria gonorrhoeae1
Neurospora crassa1
Niallia circulans1
Nicotiana glutinosa1
Nitzschia sp. VD-20081
Nocardioides pyridinolyticus JCM 103691
Nostoc phage A11
Nostoc sp. PCC 7120 = FACHB-4181
Origami vector p73081
Paenibacillus sp. SVP_S 251
Paenibacillus sp. SVP_S351
Paenibacillus sp. UR_S191
Panicum miliaceum1
Pectobacterium atrosepticum1
Penicillium oxalicum1
Pheidole spadonia1
Pichia aff. alni PL5W11
Pichia kluyveri1
Podospora comata1
Polyangium1
Porcine circovirus 21
Porphyromonas gingivalis ATCC 332771
Prochlorococcus marinus1
Prochlorococcus marinus subsp. pastoris1
Prochlorococcus sp.1
Prosthecochloris aestuarii1
Pseudoalteromonas sp. AB293f1
Pseudomonas aeruginosa PAK1
Pseudomonas aeruginosa UCBPP-PA141
Pyrococcus horikoshii1
RNA transcription vector pBRDI11
Rhodococcus jostii1
Rhodococcus sp. MB11
Saccharomyces cerevisiae AWRI16311
Saccharomyces pastorianus CBS 15131
Saccharomycetales1
Sapientia1
Scheffersomyces stipitis1
Schistosoma mansoni1
Scombridae gen. sp.1
Serratia1
Serratia sp. ATCC 390061
Shewanella algae1
Shigella flexneri 5a str. M90T1
Simulium sp. iridescent virus1
Sinorhizobium meliloti1
Sinorhizobium meliloti 10211
Sphingomonas sp. KT-11
Spinacia oleracea1
Spiroplasma melliferum1
Spodoptera frugiperda ascovirus 1c1
Spodoptera littoralis1
Spraguea lophii1
Staphylococcus lugdunensis1
Staphylococcus virus Twort1
Streptococcus pyogenes1
Streptococcus thermophilus1
Streptomyces1
Streptomyces antibioticus JCM 46201
Streptomyces avermitilis1
Streptomyces mobaraensis NBRC 13819 = DSM 408471
Streptomyces parvulus1
Streptomyces sp. Eai21
Streptomyces toyocaensis1
Streptomyces triculaminicus1
Streptomyces verticillus1
Styela clava1
Sulfolobus acidocaldarius1
Sulfurisphaera tokodaii str. 71
Sus barbatus1
Synechococcus sp.1
Synechococcus sp. PCC 70021
Synthemis1
Synthesiomyia1
Talaromyces funiculosus1
Talaromyces verruculosus1
Tatumella citrea1
Teratobaicalia1
Thermoplasma acidophilum1
Thermus1
Thermus thermophilus HB271
Thioalkalivibrio paradoxus1
Thiobacillus denitrificans ATCC 252591
Thysanoplusia daubei1
Tribolium castaneum1
Trichoderma longibrachiatum1
Trichoplasta1
Trichoplusia lectula1
Trichoplusia ni cypovirus 151
Trichoptera1
Trioceros cristatus1
Trypanosoma brucei1
Trypanosoma cruzi1
Vairimorpha necatrix1
Vesicular stomatitis virus1
Vibrio atlanticus LGP321
Vibrio cholerae 2740-801
Vibrio parahaemolyticus1
Vibrio vulnificus1
Xanthomonas hortorum pv. gardneri1
Xenopus laevis1
Yarrowia lipolytica CLIB1221
Zea mays1
Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/20131
bacterial endosymbiont of Idas sp.1
bacterium1
bacterium 2b-G121
bacterium T4521
invertebrate environmental sample1
metagenome1
pBR322 based IG-lambda expression vector1
prokaryote coculture1
unidentified adenovirus1