8TX5 | pdb_00008tx5

Crystal structure of an engineered variant of galactose oxidase, GOaseRd4BB, from Fusarium graminearum

PDB DOI: https://doi.org/10.2210/pdb8TX5/pdb

Classification: OXIDOREDUCTASE
Organism(s): Fusarium graminearum
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2023-08-22 Released: 2024-07-03
Deposition Author(s): Selvaraj, B., Orth, P.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.93 Å
R-Value Free:
0.198 (Depositor), 0.200 (DCC)
R-Value Work:
0.163 (Depositor), 0.160 (DCC)
R-Value Observed:
0.165 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Development of a Biocatalytic Aerobic Oxidation for the Manufacturing Route to Islatravir

Shaw, M.H., Fryszkowska, A., Alvizo, O., Attadgie, I., Borra-Garske, M., Devine, P.N., Duan, D., Grosser, S.T., Forstater, J.H., Hughes, G.J., Maloney, K.M., Margelefsky, E., Mattern, K.A., Miller, M.T., Nawrat, C.C., Nazor, J., Orth, P., Ouimet, C.M., Robaire, S.A., Ruccolo, S., Schwalm, E.L., Verma, D., Xiao, L., Selvaraj, B., Zhang, V.

(2023) ChemRxiv

DOI: https://doi.org/10.26434/chemrxiv-2023-fg10l

Macromolecule Content

Total Structure Weight: 278.75 kDa
Atom Count: 20,976
Modeled Residue Count: 2,556
Deposited Residue Count: 2,588
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Galactose oxidase	A, B, C, D	647	Fusarium graminearum	Mutation(s): 0 Gene Names: GAOA EC: 1.1.3.9
UniProt
Find proteins for P0CS93 (Gibberella zeae) Explore P0CS93 Go to UniProtKB: P0CS93
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P0CS93
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain F [auth A] SDF format, chain H [auth B] SDF format, chain J [auth C] SDF format, chain L [auth D] MOL2 format, chain F [auth A] MOL2 format, chain H [auth B] MOL2 format, chain J [auth C] MOL2 format, chain L [auth D] mmCIF format, chain F [auth A] mmCIF format, chain H [auth B] mmCIF format, chain J [auth C] mmCIF format, chain L [auth D]	F [auth A], H [auth B], J [auth C], L [auth D]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain F [auth A] Focus chain H [auth B] Focus chain J [auth C] Focus chain L [auth D] Interactions & Density Focus chain F [auth A] Focus chain H [auth B] Focus chain J [auth C] Focus chain L [auth D]
CU Query on CU Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain G [auth B] SDF format, chain I [auth C] SDF format, chain K [auth D] MOL2 format, chain E [auth A] MOL2 format, chain G [auth B] MOL2 format, chain I [auth C] MOL2 format, chain K [auth D] mmCIF format, chain E [auth A] mmCIF format, chain G [auth B] mmCIF format, chain I [auth C] mmCIF format, chain K [auth D]	E [auth A], G [auth B], I [auth C], K [auth D]	COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N		Interactions Focus chain E [auth A] Focus chain G [auth B] Focus chain I [auth C] Focus chain K [auth D] Interactions & Density Focus chain E [auth A] Focus chain G [auth B] Focus chain I [auth C] Focus chain K [auth D]