8S2D | pdb_00008s2d

NMR structure of entolysin A in micellar DPC solution

PDB DOI: https://doi.org/10.2210/pdb8S2D/pdb

Classification: SURFACTANT PROTEIN
Organism(s): Pseudomonas entomophila L48
Mutation(s): No

Deposited: 2024-02-16 Released: 2025-02-26
Deposition Author(s): Kovacs, B., Geudens, N., Martins, J.C.
Funding Organization(s): Research Foundation - Flanders (FWO)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 11
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

NMR structure of entolysin A in micellar DPC solution

Kovacs, B., Geudens, N., Martins, J.C.

To be published.

Macromolecule Content

Total Structure Weight: 1.76 kDa
Atom Count: 121
Modeled Residue Count: 14
Deposited Residue Count: 14
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
entolysin A	A	14	Pseudomonas entomophila L48	Mutation(s): 0
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
IG8 Query on IG8 Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	(3~{R})-3-oxidanyldecanoic acid C₁₀ H₂₀ O₃ FYSSBMZUBSBFJL-SECBINFHSA-N		Interactions Focus chain B [auth A]

Biologically Interesting Molecules (External Reference) 1 Unique

Entity ID: 1
ID	Chains	Name	Type/Class	2D Diagram	3D Interactions
PRD_002560 Query on PRD_002560	A	Entolysin A	Lipopeptide / Toxin		Interactions Focus chain A

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 11
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-02-26

Deposition Author(s):

Funding Organization	Location	Grant Number
Research Foundation - Flanders (FWO)	Belgium	EOS project G0G3118N (EOS ID 30650620)

Revision History (Full details and data files)

Version 1.0: 2025-02-26
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.