Structural insights into mechanism of activation and deactivation of prostaglandin receptors
Davoudinasab, B., Han, G.W., Cherezov, V.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
anti-BRIL Fab Heavy Chain | A [auth H] | 229 | Homo sapiens | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
anti-Fab Nanobody synthetic construct | B [auth K] | 123 | synthetic construct | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
anti-BRIL Fab Light Chain | C [auth L] | 214 | synthetic construct | Mutation(s): 0  | ![]() |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Prostaglandin D2 receptor,Soluble cytochrome b562 | D [auth A] | 495 | Homo sapiens | Mutation(s): 6  Gene Names: PTGDR, cybC | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0ABE7 (Escherichia coli) Explore P0ABE7  Go to UniProtKB:  P0ABE7 | |||||
Find proteins for Q13258 (Homo sapiens) Explore Q13258  Go to UniProtKB:  Q13258 | |||||
PHAROS:  Q13258 GTEx:  ENSG00000168229  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | Q13258P0ABE7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1BIL (Subject of Investigation/LOI) Query on A1BIL | E [auth A] | [2-chloro-5-(2,6-dimethyl-4-{[(2S)-4-methyl-3,4-dihydro-2H-1,4-benzoxazin-2-yl]methoxy}benzamido)phenyl]acetic acid C27 H27 Cl N2 O5 KHJQYLXBPSJLGG-NRFANRHFSA-N |
Task | Software Package | Version |
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MODEL REFINEMENT | PHENIX | |
RECONSTRUCTION | cryoSPARC | 4.7.0 |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R35GM127086 |